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arxiv: 0802.0224 · v2 · submitted 2008-02-02 · ❄️ cond-mat.stat-mech

Optimized free energies from bidirectional single-molecule force spectroscopy

classification ❄️ cond-mat.stat-mech
keywords forcebidirectionalenergiesfreeoptimizedpotentialssingle-moleculespectroscopy
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An optimized method for estimating path-ensemble averages using data from processes driven in opposite directions is presented. Based on this estimator, bidirectional expressions for reconstructing free energies and potentials of mean force from single-molecule force spectroscopy - valid for biasing potentials of arbitrary stiffness - are developed. Numerical simulations on a model potential indicate that these methods perform better than unidirectional strategies.

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