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Unsupervisedly Training GANs for Segmenting Digital Pathology with Automatically Generated Annotations

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arxiv 1805.10059 v2 pith:N4574TXC submitted 2018-05-25 cs.CV

classification cs.CV
keywords imagelabeladversarialdatamodelpathologysegmentationsimulated
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Recently, generative adversarial networks exhibited excellent performances in semi-supervised image analysis scenarios. In this paper, we go even further by proposing a fully unsupervised approach for segmentation applications with prior knowledge of the objects' shapes. We propose and investigate different strategies to generate simulated label data and perform image-to-image translation between the image and the label domain using an adversarial model. Specifically, we assess the impact of the annotation model's accuracy as well as the effect of simulating additional low-level image features. For experimental evaluation, we consider the segmentation of the glomeruli, an application scenario from renal pathology. Experiments provide proof of concept and also confirm that the strategy for creating the simulated label data is of particular relevance considering the stability of GAN trainings.

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  1. TUMLS: Trustful Fully Unsupervised Multi-Level Segmentation for Whole Slide Images of Histology

    eess.IV 2025-04 reject novelty 5.0 of 10

    A new unsupervised histology pipeline reports high-level tissue clustering and non-ML nucleus segmentation, claiming F1 of 77.46% and Jaccard of 63.35% on MoNuSeg.

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