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DA-RefineNet:A Dual Input Whole Slide Image Segmentation Algorithm Based on Attention
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Automatic medical image segmentation has wide applications for disease diagnosing. However, it is much more challenging than natural optical image segmentation due to the high-resolution of medical images and the corresponding huge computation cost. The sliding window is a commonly used technique for whole slide image (WSI) segmentation, however, for these methods based on the sliding window, the main drawback is lacking global contextual information for supervision. In this paper, we propose a dual-inputs attention network (denoted as DA-RefineNet) for WSI segmentation, where both local fine-grained information and global coarse information can be efficiently utilized. Sufficient comparative experiments are conducted to evaluate the effectiveness of the proposed method, the results prove that the proposed method can achieve better performance on WSI segmentation compared to methods relying on single-input.
Forward citations
Cited by 2 Pith papers
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Clustered Patch Embeddings for Permutation-Invariant Classification of Whole Slide Images
The paper proposes clustering patch embeddings into ten cluster means and classifying the mean vectors with attention MIL, reporting 0.83 accuracy on lung EGFR and 0.75 on Camelyon17 metastasis classification.
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Efficient Whole Slide Image Classification through Fisher Vector Representation
Selecting a small set of high-cellularity patches and encoding them with Fisher vectors gives whole-slide classification accuracy comparable to processing all patches, with much lower compute.
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