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Two-Dimensional Weisfeiler-Lehman Graph Neural Networks for Link Prediction

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arxiv 2206.09567 v1 pith:EDS2BT5C submitted 2022-06-20 cs.LG

classification cs.LG
keywords linkrepresentationsnodepredictiondirectlyobtainpowertests
verification ladder T0 review T1 audit T2 compute T3 formal
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Link prediction is one important application of graph neural networks (GNNs). Most existing GNNs for link prediction are based on one-dimensional Weisfeiler-Lehman (1-WL) test. 1-WL-GNNs first compute node representations by iteratively passing neighboring node features to the center, and then obtain link representations by aggregating the pairwise node representations. As pointed out by previous works, this two-step procedure results in low discriminating power, as 1-WL-GNNs by nature learn node-level representations instead of link-level. In this paper, we study a completely different approach which can directly obtain node pair (link) representations based on \textit{two-dimensional Weisfeiler-Lehman (2-WL) tests}. 2-WL tests directly use links (2-tuples) as message passing units instead of nodes, and thus can directly obtain link representations. We theoretically analyze the expressive power of 2-WL tests to discriminate non-isomorphic links, and prove their superior link discriminating power than 1-WL. Based on different 2-WL variants, we propose a series of novel 2-WL-GNN models for link prediction. Experiments on a wide range of real-world datasets demonstrate their competitive performance to state-of-the-art baselines and superiority over plain 1-WL-GNNs.

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Cited by 1 Pith paper

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  1. Attribute-Enhanced Similarity Ranking for Sparse Link Prediction

    cs.LG 2024-11 conditional novelty 6.0 of 10

    Under unbiased all-pairs evaluation, GNN link prediction performance drops sharply, and the proposed Gelato method, which learns attribute-weighted Autocovariance ranking, outperforms GNN baselines on most datasets.

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