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Graph Transformers for Large Graphs

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arxiv 2312.11109 v1 pith:AV6RVWE2 submitted 2023-12-18 cs.LG

classification cs.LG
keywords graphglobalgraphsnodesamplingattentionlargelarge-scale
verification ladder T0 review T1 audit T2 compute T3 formal
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Transformers have recently emerged as powerful neural networks for graph learning, showcasing state-of-the-art performance on several graph property prediction tasks. However, these results have been limited to small-scale graphs, where the computational feasibility of the global attention mechanism is possible. The next goal is to scale up these architectures to handle very large graphs on the scale of millions or even billions of nodes. With large-scale graphs, global attention learning is proven impractical due to its quadratic complexity w.r.t. the number of nodes. On the other hand, neighborhood sampling techniques become essential to manage large graph sizes, yet finding the optimal trade-off between speed and accuracy with sampling techniques remains challenging. This work advances representation learning on single large-scale graphs with a focus on identifying model characteristics and critical design constraints for developing scalable graph transformer (GT) architectures. We argue such GT requires layers that can adeptly learn both local and global graph representations while swiftly sampling the graph topology. As such, a key innovation of this work lies in the creation of a fast neighborhood sampling technique coupled with a local attention mechanism that encompasses a 4-hop reception field, but achieved through just 2-hop operations. This local node embedding is then integrated with a global node embedding, acquired via another self-attention layer with an approximate global codebook, before finally sent through a downstream layer for node predictions. The proposed GT framework, named LargeGT, overcomes previous computational bottlenecks and is validated on three large-scale node classification benchmarks. We report a 3x speedup and 16.8% performance gain on ogbn-products and snap-patents, while we also scale LargeGT on ogbn-papers100M with a 5.9% performance improvement.

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Cited by 2 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. Plain Transformers are Surprisingly Powerful Link Predictors

    cs.LG 2026-02 conditional novelty 6.0 of 10

    A plain-style Transformer over sampled local subgraphs, with a multiplicative adjacency residual, reaches state-of-the-art link prediction on several benchmarks without node IDs or hand-crafted heuristics.

  2. Tokenphormer: Structure-aware Multi-token Graph Transformer for Node Classification

    cs.LG 2024-12 conditional novelty 6.0 of 10

    Tokenphormer combines walk-tokens, SGPM-tokens, and hop-tokens in a graph transformer and reports improved node classification accuracy on several benchmark graphs.

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