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Paper Citation Record · LEDGER

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction

As of 21 August 2026, this Paper Citation Record lists 14 of 14 outbound references and 2 inbound Pith citation observations for arXiv:2510.01632.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2510.01632 v3

Coverage vector

measured 14 of 14 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-05-21T22:02:20.544141Z

measured 16 of 16 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-20T06:33:59.587034+00:00

measured 2 of 2 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-06-27T18:24:29.439691Z

measured 1 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-05T02:28:24.338817Z

Reference resolution

14 of 14 outbound references displayed

  • verified exact12
  • verified fuzzy2
  • unresolved0
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

0
pith, observed 2026-08-05T02:28:24.338817Z

Outbound references

Observation ca4770b1-c0d1-4bfd-bfae-361e7526dd3a · outbound

This paper cites Estimating or Propagating Gradients Through Stochastic Neurons for Conditional Computation.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Estimating or Propagating Gradients Through Stochastic Neurons for Conditional Computation

Reference 1

Resolution
verified exact
local_arxiv, observed 2026-05-21T22:04:24.156095Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:1d2a4e67d1e4a73e615c68ac8b7c08b36ca0b1d685930d1839d8e1f918fff9d4

Observation fdf7e383-dbd8-4917-9919-e25c29e2f7c9 · outbound

This paper cites Endowing Protein Language Models with Structural Knowledge.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Endowing Protein Language Models with Structural Knowledge

Reference 2

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.151247Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:dedebbb453e61c67e83e5a79a0dfd2abea2300e0a58b244f1b2ecd098ffc2cd7

Observation 4a69c519-c668-4b84-b68a-18cfe2322e8e · outbound

This paper cites Romanos Fasoulis, Georgios Paliouras, and Lydia E Kavraki.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Romanos Fasoulis, Georgios Paliouras, and Lydia E Kavraki

Reference 3

Resolution
verified exact
doi, observed 2026-05-21T22:04:23.839149Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:7f201756b30580a95adcf831d61746eb98dbe03dc04ac9acdbc97b0029ba31db

Observation 7bdcac41-d05a-4022-9fd8-59481fa9ec6d · outbound

This paper cites Simplicial Attention Networks.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Simplicial Attention Networks

Reference 4

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.140691Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:c881409f98d59d2930c2c1dac2c3df5f7d578bdb2291b9f2dae91f136a7b26e3

Observation 8fd5fded-f356-4bde-8335-63f34e9cb927 · outbound

This paper cites Categorical Reparameterization with Gumbel-Softmax.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Categorical Reparameterization with Gumbel-Softmax

Reference 5

Resolution
verified exact
local_arxiv, observed 2026-05-21T22:04:24.144936Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:2bf6e3506f349a5c4671ad8bc18f85d26e52cdb2d88e6cea5b1e7bad78445b22

Observation 7213b4db-b5a7-473a-8e4f-2ef6eefe10ce · outbound

This paper cites Learning from Protein Structure with Geometric Vector Perceptrons.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Learning from Protein Structure with Geometric Vector Perceptrons

Reference 6

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.135328Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:8cb84e6883a4c4a20976dc5668e6986b5443d18ee457e8927921c21d5cbfdb0a

Observation f16cdbf9-21ca-4df8-9a1b-141473553e27 · outbound

This paper cites Georg Kustatscher, Tom Collins, Anne-Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S Lilley, Emma Lundberg, Edward M Marcotte, Markus Ralser, et al.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Georg Kustatscher, Tom Collins, Anne-Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S Lilley, Emma Lundberg, Edward M Marcotte, Markus Ralser, et al

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-05-21T22:04:24.532116Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:055a975af07e3c4fd315f9069f7a5a9df9533aeb0efe5c9cff6f4ffae21753df

Observation ad15fd7b-0b61-4344-abe7-a594f42460cb · outbound

This paper cites an unresolved cited work.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Unresolved cited work

Reference 8

Resolution
verified exact
doi, observed 2026-05-21T22:04:23.841798Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:83f05189fc96a40b1d5398e8d08083c72214873af12a820e8ca78e97ad2f7fb2

Observation 7302a9a8-489a-4b71-bc70-82275a0c5625 · outbound

This paper cites Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunities.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunities

Reference 9

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.149704Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:04e59b7727ae960c2d5905296e81c18711f362fa25aeca2ae4b85b735b0e276f

Observation 2168ba07-ae43-4bb0-9844-9ab01379b388 · outbound

This paper cites Aaron Van Den Oord, Oriol Vinyals, et al.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Aaron Van Den Oord, Oriol Vinyals, et al

Reference 10

Resolution
verified exact
doi, observed 2026-05-21T22:04:23.836214Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:108ab5c8d21426e6eb3333f199709fb2c1c9d141c823f69b78567a2b266117a0

Observation 7bb773a2-177d-4073-b58f-f5fe332a4bbf · outbound

This paper cites Topotein: Topological Deep Learning for Protein Representation Learning.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Topotein: Topological Deep Learning for Protein Representation Learning

Reference 11

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.129935Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:c85d893a89bd4173bbce3b267080fef0973a18a020c368967f6650b34187d330

Observation d399bb84-d87d-4b2b-b83e-7d5304f6f94c · outbound

This paper cites A Survey on Protein Representation Learning: Retrospect and Prospect.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction A Survey on Protein Representation Learning: Retrospect and Prospect

Reference 12

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.140808Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:76f231e86dbd908578dad2ccbaf3f6dbc80c59f5a9dda8b6142e8e91b940c306

Observation b68abf60-585f-4421-bef6-3e16acf865c6 · outbound

This paper cites Protein Representation Learning by Geometric Structure Pretraining.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction Protein Representation Learning by Geometric Structure Pretraining

Reference 13

Resolution
verified exact
arxiv_id, observed 2026-05-21T22:04:24.146577Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:7b66c43f71be5ab9fe4057487d0609b804ee735768673955ac8e965abb77f99b

Observation 8ecdb0c9-0bad-4412-aa12-512d2d829530 · outbound

This paper cites All LLM-produced code and text was thoroughly double-checked.

BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction All LLM-produced code and text was thoroughly double-checked

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-05-21T22:04:24.535254Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-05-21T22:02:20.544141Z digest=sha256:022030d8f1faf9ed6cf5fbc6f3faf942c94ec144b0d6836765a7cce87638ddcd

Pith citing papers

Observation f71c224d-e73b-45b4-ac50-a2b72d8d6c43 · inbound

Structural Interpretations of Protein Language Model Representations via Differentiable Graph Partitioning cites this paper.

Structural Interpretations of Protein Language Model Representations via Differentiable Graph Partitioning BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction

Reference 13

Resolution
metadata mismatch
local_arxiv, observed 2026-05-13T07:22:28.838282Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=arxiv_source observed=2026-05-13T07:20:50.755837Z digest=sha256:79e0250da85bee04a657fd81fad4fff62e7d3a0d6f1cf8680c19798d3aabd814

Observation 6c0b5cb4-e14b-4a94-8e88-fb64a2c9cd02 · inbound

PaperMentor: A Human-Centered Multi-Agent Writing Tutor for AI Research Papers on Overleaf cites this paper.

PaperMentor: A Human-Centered Multi-Agent Writing Tutor for AI Research Papers on Overleaf BioBlobs: Unsupervised Discovery of Functional Substructures for Protein Function Prediction

Reference 49

Resolution
metadata mismatch
local_arxiv, observed 2026-06-27T18:31:08.033625Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=arxiv_source observed=2026-06-27T18:24:29.439691Z digest=sha256:60f57099746881ed7630f028033e895c391c932641b296ffd06e0076723381d3