Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering | Paper Citation Record

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This paper cites The molecular basis for cellular function of intrinsically disordered protein regions.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering The molecular basis for cellular function of intrinsically disordered protein regions

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This paper cites Dissecting the biophysics and biology of in- trinsically disordered proteins.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Dissecting the biophysics and biology of in- trinsically disordered proteins

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This paper cites Principles of protein structural ensemble determination.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Principles of protein structural ensemble determination

Reference 3

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 4

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This paper cites Folding-upon-binding pathways of an intrinsically disordered protein from a deep markov state model.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Folding-upon-binding pathways of an intrinsically disordered protein from a deep markov state model

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This paper cites Small molecules targeting the disordered trans- activation domain of the androgen receptor induce the formation of collapsed helical states.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Small molecules targeting the disordered trans- activation domain of the androgen receptor induce the formation of collapsed helical states

Reference 6

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This paper cites Donchev, Paul Robustelli, and David E.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Donchev, Paul Robustelli, and David E

Reference 7

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This paper cites Charmm36m: an improved force field for folded and intrin- sically disordered proteins.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Charmm36m: an improved force field for folded and intrin- sically disordered proteins

Reference 8

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This paper cites Balanced protein–water interactions improve prop- erties of disordered proteins and non-specific protein association.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Balanced protein–water interactions improve prop- erties of disordered proteins and non-specific protein association

Reference 9

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 10

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This paper cites Enhanced sampling methods for molecular dynamics simulations.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Enhanced sampling methods for molecular dynamics simulations

Reference 11

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Observation 37506749-e877-4ac5-b117-9f6f840964b2 · outbound

This paper cites Replica-exchange molecular dynamics method for protein folding.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Replica-exchange molecular dynamics method for protein folding

Reference 12

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This paper cites Parallel tempering algorithm for conformational studies of biological molecules.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Parallel tempering algorithm for conformational studies of biological molecules

Reference 13

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This paper cites Friesner, and B.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Friesner, and B

Reference 14

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This paper cites Friesner, and B.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Friesner, and B

Reference 15

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Observation d5e0d5f6-1707-496b-b8ca-7225bd33d7d1 · outbound

This paper cites Hamiltonian replica exchange in gromacs: a flexible implementation.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Hamiltonian replica exchange in gromacs: a flexible implementation

Reference 16

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Observation bcd788e9-8cb0-42ec-bdfe-ae038d6d2eb1 · outbound

This paper cites Gromacs: fast, flexible, and free.Journal of computational chemistry, 26:1701–18, 12 2005.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Gromacs: fast, flexible, and free.Journal of computational chemistry, 26:1701–18, 12 2005

Reference 17

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This paper cites Gromacs: High performance molecular simulations through multi-level parallelism from laptops to supercomputers.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Gromacs: High performance molecular simulations through multi-level parallelism from laptops to supercomputers

Reference 18

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Observation 89aae7a1-33f8-482a-b1e3-f085520da329 · outbound

This paper cites Broglia, and Michele Parrinello.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Broglia, and Michele Parrinello

Reference 19

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This paper cites Tribello, Massimiliano Bonomi, Davide Branduardi, Carlo Camilloni, and Giovanni Bussi.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Tribello, Massimiliano Bonomi, Davide Branduardi, Carlo Camilloni, and Giovanni Bussi

Reference 20

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This paper cites Flexible selection of the solute region in replica exchange with solute tempering: Application to protein-folding simulations.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Flexible selection of the solute region in replica exchange with solute tempering: Application to protein-folding simulations

Reference 21

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This paper cites Replica exchange with solute tempering for protein conformational sampling.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Replica exchange with solute tempering for protein conformational sampling

Reference 22

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Observation 30902891-e62d-4a44-b432-df947797a8b3 · outbound

This paper cites High resolution ensemble descrip- tion of metamorphic and intrinsically disordered proteins using an efficient hybrid parallel tempering scheme.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering High resolution ensemble descrip- tion of metamorphic and intrinsically disordered proteins using an efficient hybrid parallel tempering scheme

Reference 23

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This paper cites Re-balancing replica exchange with solute temper- ing for sampling dynamic protein conformations.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Re-balancing replica exchange with solute temper- ing for sampling dynamic protein conformations

Reference 24

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Observation 6337929f-e5d6-4263-94c1-2dd992e51efd · outbound

This paper cites Pan, and David E.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Pan, and David E

Reference 25

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Observation fc8c51c5-3e96-4dd3-89a0-8b4fc9af043f · outbound

This paper cites Canonical sampling through velocity rescaling.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Canonical sampling through velocity rescaling

Reference 26

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This paper cites Replica exchange with solute tempering: efficiency in large scale systems.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Replica exchange with solute tempering: efficiency in large scale systems

Reference 27

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This paper cites Replica temperatures for uniform exchange and efficient roundtrip times in explicit solvent parallel tempering simulations.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Replica temperatures for uniform exchange and efficient roundtrip times in explicit solvent parallel tempering simulations

Reference 28

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This paper cites Heterogeneous parallelization and acceleration of molecular dynamics simulations in gromacs.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Heterogeneous parallelization and acceleration of molecular dynamics simulations in gromacs

Reference 29

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This paper cites VMD – Visual Molecular Dynamics.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering VMD – Visual Molecular Dynamics

Reference 30

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering The PyMOL molecular graphics system, version 1.8

Reference 31

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This paper cites C.Stephen Chan, and Zhenquan Hu.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering C.Stephen Chan, and Zhenquan Hu

Reference 32

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

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This paper cites Matplotlib: Visualization with python, August 2024.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Matplotlib: Visualization with python, August 2024

Reference 34

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Harris, K

Reference 36

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This paper cites Oliphant, Matt Haberland, Tyler Reddy, David Courna- peau, Evgeni Burovski, Pearu Peterson, Warren Weckesser, Jonathan Bright, Stéfan J.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Oliphant, Matt Haberland, Tyler Reddy, David Courna- peau, Evgeni Burovski, Pearu Peterson, Warren Weckesser, Jonathan Bright, Stéfan J

Reference 37

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering McGibbon, Kyle A

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Denning, Thomas B

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Mdanalysis: A python package for the rapid analysis of molecular dynamics simulations

Reference 40

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Flyvbjerg and H

Reference 41

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This paper cites pyblock: A python module for performing a reblocking analysis on serially-correlated data, 2020.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering pyblock: A python module for performing a reblocking analysis on serially-correlated data, 2020

Reference 42

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This paper cites Gromacs 2022.5 source code (2022.5), 2023.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Gromacs 2022.5 source code (2022.5), 2023

Reference 43

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This paper cites Force field development and simulations of intrinsically disor- dered proteins.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Force field development and simulations of intrinsically disor- dered proteins

Reference 44

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This paper cites Water dispersion inter- actions strongly influence simulated structural properties of disordered protein states.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Water dispersion inter- actions strongly influence simulated structural properties of disordered protein states

Reference 45

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering de Groot

Reference 46

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This paper cites Avogadro: an advanced semantic chemical editor, visualization, and analysis platform.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Avogadro: an advanced semantic chemical editor, visualization, and analysis platform

Reference 47

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This paper cites General purpose water model can improve atomistic simulations of intrinsically disordered proteins.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering General purpose water model can improve atomistic simulations of intrinsically disordered proteins

Reference 48

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This paper cites Lotthammer, Garrett M.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Lotthammer, Garrett M

Reference 49

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This paper cites The analytical flory random coil is a simple-to-use reference model for unfolded and disordered proteins.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering The analytical flory random coil is a simple-to-use reference model for unfolded and disordered proteins

Reference 50

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

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Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 53

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No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 19ff2ac5-385f-42fe-a144-e00c99fc8eee · outbound

This paper cites Fluctuation formulas in molecular-dynamics simulations with the weak coupling heat bath.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Fluctuation formulas in molecular-dynamics simulations with the weak coupling heat bath

Reference 54

Resolution: verified exact; doi, observed 2026-08-16T04:17:07.555006Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation b9164846-3489-4507-bfe8-6128b66ae662 · outbound

This paper cites Dynamic attractor for the berendsen thermostat an the slow dynamics of biomacromolecules.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Dynamic attractor for the berendsen thermostat an the slow dynamics of biomacromolecules

Reference 55

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T04:17:07.823401Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 2a58eb1f-6530-43f1-90de-48d558b68489 · outbound

This paper cites an unresolved cited work.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 56

Resolution: verified exact; doi, observed 2026-08-16T04:17:07.540136Z

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No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 41098e30-2898-4aab-9c90-ed75be3242d7 · outbound

This paper cites Crystal structure and pair potentials: A molecular-dynamics study.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Crystal structure and pair potentials: A molecular-dynamics study

Reference 57

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T04:17:07.809063Z

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No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 3ac47d08-9a93-4e6c-807a-3627cc5a95e6 · outbound

This paper cites Elucidating the folding problem ofα-helices: local motifs, long-range electrostatics, ionic-strength dependence and prediction of nmr parameters.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Elucidating the folding problem ofα-helices: local motifs, long-range electrostatics, ionic-strength dependence and prediction of nmr parameters

Reference 58

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T04:17:07.793441Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 13524265-85ec-4ead-a019-a266bbabe144 · outbound

This paper cites an unresolved cited work.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 59

Resolution: unresolved; raw_fallback, observed 2026-08-16T04:17:07.779593Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation c0e6c7af-288d-42e7-99e8-70f44f92ae15 · outbound

This paper cites an unresolved cited work.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 60

Resolution: malformed identifier; raw_fallback, observed 2026-08-16T04:17:07.766030Z

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No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 09056c44-e93e-4203-8de9-d29674d9c816 · outbound

This paper cites 30 BIBLIOGRAPHY.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering 30 BIBLIOGRAPHY

Reference 1984

Resolution: unresolved; no resolver link, observed 2026-08-16T04:17:07.466912Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 590dd34d-9fe5-422d-859f-f20af471aa88 · outbound

This paper cites an unresolved cited work.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 1994

Resolution: verified exact; doi, observed 2026-08-16T04:17:07.569375Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation ef438665-ce4e-4666-8db8-bde7e379d824 · outbound

This paper cites an unresolved cited work.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering Unresolved cited work

Reference 2007

Resolution: unresolved; no resolver link, observed 2026-08-16T04:17:07.388448Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 76a82566-a476-4c71-9787-689bc98d54e5 · outbound

This paper cites doi: 10.1002/WCMS.1298.

Performing all-atom molecular dynamics simulations of intrinsically disordered proteins with replica exchange solute tempering doi: 10.1002/WCMS.1298

Reference 2017

Resolution: verified exact; doi, observed 2026-08-16T04:17:07.675175Z

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No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

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