pith. sign in

arxiv: 1603.01132 · v1 · pith:3FSUQWXEnew · submitted 2016-02-22 · ⚛️ physics.soc-ph · cond-mat.stat-mech· math.PR

The limitations of discrete-time approaches to continuous-time contagion dynamics

classification ⚛️ physics.soc-ph cond-mat.stat-mechmath.PR
keywords continuous-timediscrete-timeschemestimeapproachescontagionsdiscretizingemployed
0
0 comments X p. Extension
pith:3FSUQWXE Add to your LaTeX paper What is a Pith Number?
\usepackage{pith}
\pithnumber{3FSUQWXE}

Prints a linked pith:3FSUQWXE badge after your title and writes the identifier into PDF metadata. Compiles on arXiv with no extra files. Learn more

read the original abstract

Continuous-time Markov process models of contagions are widely studied, not least because of their utility in predicting the evolution of real-world contagions and in formulating control measures. It is often the case, however, that discrete-time approaches are employed to analyze such models or to simulate them numerically. In such cases, time is discretized into uniform steps and transition rates between states are replaced by transition probabilities. In this paper, we illustrate potential limitations to this approach. We show how discretizing time leads to a restriction on the values of the model parameters that can accurately be studied. We examine numerical simulation schemes employed in the literature, showing how synchronous-type updating schemes can bias discrete-time formalisms when compared against continuous-time formalisms. Event-based simulations, such as the Gillespie algorithm, are proposed as optimal simulation schemes both in terms of replicating the continuous-time process and computational speed. Finally, we show how discretizing time can affect the value of the epidemic threshold for large values of the infection rate and the recovery rate, even if the ratio between the former and the latter is small.

This paper has not been read by Pith yet.

discussion (0)

Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.