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Agentic Medical Knowledge Graphs Enhance Medical Question Answering: Bridging the Gap Between LLMs and Evolving Medical Knowledge

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arxiv 2502.13010 v3 pith:4ABJSKKI submitted 2025-02-18 cs.CL cs.MA

classification cs.CLcs.MA
keywords medicalknowledgeamg-ragaccuracyagenticevidenceexternalgraphs
verification ladder T0 review T1 audit T2 compute T3 formal
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Large Language Models (LLMs) have significantly advanced medical question-answering by leveraging extensive clinical data and medical literature. However, the rapid evolution of medical knowledge and the labor-intensive process of manually updating domain-specific resources pose challenges to the reliability of these systems. To address this, we introduce Agentic Medical Graph-RAG (AMG-RAG), a comprehensive framework that automates the construction and continuous updating of medical knowledge graphs, integrates reasoning, and retrieves current external evidence, such as PubMed and WikiSearch. By dynamically linking new findings and complex medical concepts, AMG-RAG not only improves accuracy but also enhances interpretability in medical queries. Evaluations on the MEDQA and MEDMCQA benchmarks demonstrate the effectiveness of AMG-RAG, achieving an F1 score of 74.1 percent on MEDQA and an accuracy of 66.34 percent on MEDMCQA, outperforming both comparable models and those 10 to 100 times larger. Notably, these improvements are achieved without increasing computational overhead, highlighting the critical role of automated knowledge graph generation and external evidence retrieval in delivering up-to-date, trustworthy medical insights.

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Cited by 3 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. Improving Biomedical Knowledge Graph Quality: A Community Approach

    q-bio.OT 2025-08 conditional novelty 6.0 of 10

    Applying a 28-item scorecard to 16 biomedical knowledge graphs shows most lack versioning, provenance, and licensing details; only RTX-KG2 passed every check.

  2. SlimRAG: Retrieval without Graphs via Entity-Aware Context Selection

    cs.IR 2025-06 conditional novelty 5.0 of 10

    SlimRAG shows that an entity-aware inverted index without graphs can match or beat graph-based RAG retrieval on HotpotQA while using far fewer index tokens.

  3. Retrieval Augmented Biomedical Question Answering with Weak Question Recovery and Neural Reranking for BioASQ Task 14b

    cs.CL 2026-08 conditional novelty 4.0 of 10

    A BioASQ 14b pipeline with weak-question recovery and MiniLM reranking improves MAP@10 by about 28% on Batch 4, but without an isolated component ablation.

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