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An Efficient Implementation of Riemannian Manifold Hamiltonian Monte Carlo for Gaussian Process Models
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abstract
This technical report presents pseudo-code for a Riemannian manifold Hamiltonian Monte Carlo (RMHMC) method to efficiently simulate samples from $N$-dimensional posterior distributions $p(x|y)$, where $x \in R^N$ is drawn from a Gaussian Process (GP) prior, and observations $y_n$ are independent given $x_n$. Sufficient technical and algorithmic details are provided for the implementation of RMHMC for distributions arising from GP priors.
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Hessian-informed, Coordinate Friendly Hamiltonian Monte Carlo in Linear Time
A graph-manipulation technique reduces the cost of diagonal-preconditioned RHMC fixed-point iterations from quadratic to linear in dimension for coordinate-friendly targets.
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