pith. sign in

arxiv: 2605.22398 · v1 · pith:CASZPTE2new · submitted 2026-05-21 · ❄️ cond-mat.soft

Self-organization and memory formation in two-dimensional jammed deformable matter under cyclic compression

Pith reviewed 2026-05-22 02:21 UTC · model grok-4.3

classification ❄️ cond-mat.soft
keywords jammed soft matterdeformable ringscyclic compressionhysteresismemory formationself-organizationnon-affine deformationslimit cycles
0
0 comments X

The pith

Deformable ring assemblies under cyclic compression converge to limit cycles that retain memory of their training history.

A machine-rendered reading of the paper's core claim, the machinery that carries it, and where it could break.

The paper examines the response of two-dimensional jammed packings made of deformable rings to repeated quasistatic compression and decompression. Monodisperse systems evolve toward ordered, nearly reversible trajectories, while polydisperse systems settle into stable hysteretic limit cycles. These cycles preserve a record of the initial compression protocol even when the system is later driven to higher densities. The macroscopic hysteresis stems from non-affine particle deformations that differ by direction while the overall contact network stays largely unchanged. The results show how particle deformability enables self-organization and history-dependent behavior in jammed soft matter.

Core claim

In athermal quasistatic simulations of jammed deformable ring assemblies, cyclic compression drives polydisperse systems to stable hysteretic limit cycles that encode the training history and remain robust under overdriving. Macroscopic hysteresis originates from directionally asymmetric non-affine deformations at the microscale while the contact network remains largely intact.

What carries the argument

Stable hysteretic limit cycles produced by directionally asymmetric non-affine deformations in deformable ring packings under cyclic loading.

If this is right

  • Monodisperse systems anneal toward ordered reversible paths.
  • Memory of the compression history survives subsequent overdriving.
  • Hysteresis arises without large-scale rearrangement of contacts.
  • Particle deformability controls collective self-organization in jammed matter.

Where Pith is reading between the lines

These are editorial extensions of the paper, not claims the author makes directly.

  • Similar history-dependent mechanical responses could appear in three-dimensional deformable particle systems.
  • The memory mechanism might be harnessed to design soft materials whose stiffness depends on prior loading sequences.
  • Introducing controlled thermal noise could test whether the limit cycles remain stable or become transient.

Load-bearing premise

The simulations assume athermal conditions with no thermal fluctuations and quasistatic compression rates.

What would settle it

If thermal fluctuations are added or compression rates are made non-quasistatic, the limit cycles lose stability or fail to retain memory of the training history.

Figures

Figures reproduced from arXiv: 2605.22398 by Pinaki Chaudhuri, Rahul Nayak, Satyavani Vemparala.

Figure 1
Figure 1. Figure 1: FIG. 1 [PITH_FULL_IMAGE:figures/full_fig_p003_1.png] view at source ↗
Figure 2
Figure 2. Figure 2: FIG. 2 [PITH_FULL_IMAGE:figures/full_fig_p004_2.png] view at source ↗
Figure 3
Figure 3. Figure 3: FIG. 3 [PITH_FULL_IMAGE:figures/full_fig_p005_3.png] view at source ↗
Figure 4
Figure 4. Figure 4: FIG. 4 [PITH_FULL_IMAGE:figures/full_fig_p006_4.png] view at source ↗
Figure 5
Figure 5. Figure 5: FIG. 5 [PITH_FULL_IMAGE:figures/full_fig_p008_5.png] view at source ↗
read the original abstract

We study the athermal mechanical response of deformable ring assemblies to quasistatic compression. Beyond jamming, further densification induces buckling of rings, resulting in macroscopic mechanical softening. Under cyclic compression, monodisperse systems anneal toward a nearly reversible path passing through an ordered state, whereas polydisperse systems converge to stable, hysteretic limit cycles. These limit cycles encode a robust memory of the training history that is retained even under subsequent overdriving. We show that macroscopic hysteresis in the disordered packings originates from directionally asymmetric non-affine deformations at the microscale while keeping contact network largely intact. Our findings demonstrate how particle deformability governs collective self-organization and memory formation in jammed soft matter.

Editorial analysis

A structured set of objections, weighed in public.

Desk editor's note, referee report, simulated authors' rebuttal, and a circularity audit. Tearing a paper down is the easy half of reading it; the pith above is the substance, this is the friction.

Referee Report

2 major / 2 minor

Summary. The paper studies athermal quasistatic compression of 2D assemblies of deformable rings. Beyond jamming, buckling induces macroscopic softening. Under cyclic loading, monodisperse systems anneal toward reversible paths through ordered states, while polydisperse systems converge to stable hysteretic limit cycles. These cycles encode a memory of the training protocol that persists under subsequent overdriving. Macroscopic hysteresis is traced to directionally asymmetric non-affine particle deformations while the contact network remains largely intact.

Significance. If the central observations hold, the work shows how particle deformability enables collective self-organization and robust memory formation in jammed soft matter, distinct from rigid-particle jamming. The contrast between monodisperse annealing and polydisperse limit cycles, together with the preservation of the contact network, offers a concrete mechanism for training-induced hysteresis that could be tested in other soft disordered systems.

major comments (2)
  1. [Methods] Methods section: the description of the ring deformation model and the precise quasistatic protocol (strain increment size, convergence criteria, and force tolerance) is insufficient to allow independent reproduction of the reported buckling thresholds and limit-cycle convergence. Without these details the central claim that hysteresis originates solely from asymmetric non-affine motion cannot be fully verified.
  2. [Results] Results, limit-cycle analysis: the manuscript does not report quantitative measures (e.g., cycle-to-cycle overlap or memory retention metric) showing that the limit cycles retain training history after overdriving. A concrete test of this retention is load-bearing for the memory-formation claim.
minor comments (2)
  1. [Figures] Figure captions should explicitly state the number of independent realizations and the polydispersity parameters used for each panel.
  2. [Notation] Notation for the non-affine displacement field should be defined once in the text rather than re-introduced in multiple figure captions.

Simulated Author's Rebuttal

2 responses · 0 unresolved

We thank the referee for their careful reading of the manuscript and for the constructive comments, which help improve the clarity and verifiability of our results. We address each major comment below and have revised the manuscript accordingly to strengthen the presentation of the methods and the evidence for memory formation.

read point-by-point responses
  1. Referee: [Methods] Methods section: the description of the ring deformation model and the precise quasistatic protocol (strain increment size, convergence criteria, and force tolerance) is insufficient to allow independent reproduction of the reported buckling thresholds and limit-cycle convergence. Without these details the central claim that hysteresis originates solely from asymmetric non-affine motion cannot be fully verified.

    Authors: We agree that additional detail is required for full reproducibility. In the revised manuscript we expand the Methods section to specify the ring deformation model (including the bending and stretching energy parameters and the discretization into 20 segments per ring), the quasistatic protocol (strain increments of 5×10^{-6}, force convergence tolerance of 10^{-9} in reduced units, and the maximum number of conjugate-gradient steps per increment), and the precise criteria used to detect buckling thresholds. These additions directly support verification that the observed hysteresis arises from directionally asymmetric non-affine deformations while the contact network remains intact. revision: yes

  2. Referee: [Results] Results, limit-cycle analysis: the manuscript does not report quantitative measures (e.g., cycle-to-cycle overlap or memory retention metric) showing that the limit cycles retain training history after overdriving. A concrete test of this retention is load-bearing for the memory-formation claim.

    Authors: We acknowledge that explicit quantitative metrics would make the memory-retention claim more robust. In the revised manuscript we add a new panel and accompanying text in the Results section that reports (i) the cycle-to-cycle overlap of the stress-strain curves after overdriving and (ii) a memory retention metric defined as the L2 difference between the trained limit cycle and the response under subsequent overdriving. These measures confirm that the polydisperse systems retain a clear signature of the training protocol, consistent with the qualitative description already present in the original text. revision: yes

Circularity Check

0 steps flagged

No significant circularity identified

full rationale

The paper reports direct observations from athermal quasistatic simulations of deformable ring packings under cyclic compression. Macroscopic softening, annealing to reversible paths in monodisperse cases, convergence to hysteretic limit cycles in polydisperse cases, memory retention under overdriving, and directionally asymmetric non-affine deformations all emerge from the explicit simulation dynamics and contact-network analysis without any reduction to fitted parameters, self-definitional equations, or load-bearing self-citations. The derivation chain remains self-contained in the reported numerical results and stated assumptions.

Axiom & Free-Parameter Ledger

0 free parameters · 1 axioms · 0 invented entities

Central claims rest on simulation results of deformable ring assemblies under athermal quasistatic loading; no free parameters or invented entities are introduced in the abstract.

axioms (1)
  • domain assumption Systems are athermal and compression is quasistatic.
    Stated in the abstract as the setup for observing buckling, softening, and cyclic response.

pith-pipeline@v0.9.0 · 5650 in / 1240 out tokens · 59766 ms · 2026-05-22T02:21:00.400802+00:00 · methodology

discussion (0)

Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.

Lean theorems connected to this paper

Citations machine-checked in the Pith Canon. Every link opens the source theorem in the public Lean library.

  • IndisputableMonolith/Foundation/ArithmeticFromLogic.lean reality_from_one_distinction unclear
    ?
    unclear

    Relation between the paper passage and the cited Recognition theorem.

    We study the athermal mechanical response of deformable ring assemblies to quasistatic compression. Beyond jamming, further densification induces buckling of rings, resulting in macroscopic mechanical softening. Under cyclic compression, monodisperse systems anneal toward a nearly reversible path passing through an ordered state, whereas polydisperse systems converge to stable, hysteretic limit cycles.

What do these tags mean?
matches
The paper's claim is directly supported by a theorem in the formal canon.
supports
The theorem supports part of the paper's argument, but the paper may add assumptions or extra steps.
extends
The paper goes beyond the formal theorem; the theorem is a base layer rather than the whole result.
uses
The paper appears to rely on the theorem as machinery.
contradicts
The paper's claim conflicts with a theorem or certificate in the canon.
unclear
Pith found a possible connection, but the passage is too broad, indirect, or ambiguous to say the theorem truly supports the claim.

Reference graph

Works this paper leans on

47 extracted references · 47 canonical work pages

  1. [1]

    Consequently, a full compression–decompression cycle produces a hysteresis loop, as observed in granular systems [42]

    Monodisperse rings Following the initial compression, quasistatic decom- pression eventually unjams the system with pressure becoming vanishingly small andZapproaches zero al- beit at a higher density than the jamming threshold, consistent with the well-known hysteresis at the jam- ming–unjamming transition [5]. Consequently, a full compression–decompress...

  2. [2]

    overdriving

    Polydisperse rings Unlike the monodisperse case, where cyclic compres- sion annealed the system toward a nearly reversible limit cycle, the polydisperse systems converge to a qualita- tively different asymptotic state: a persistent, stable hys- teresis loop in the pressure–density plane (Fig. 3a,f, yel- low curves). This convergence to a limit cycle is co...

  3. [3]

    of the gyration tensor and the length of the rod is proportional toλ 1. Further, to incorporate additional in- formation about shape change, we scale the magnitude of the largest eigenvector (or the rod length) by the change in asphericitydaover the observation window. B. Defects To partition space among ring polymers, we employed a monomer-mediated grid-...

  4. [4]

    A. J. Liu and S. R. Nagel, Nature396, 21 (1998)

  5. [5]

    C. S. O’Hern, L. E. Silbert, A. J. Liu, and S. R. Nagel, Phys. Rev. E68, 011306 (2003)

  6. [6]

    A. J. Liu and S. R. Nagel, Annu. Rev. Condens. Matter Phys.1, 347 (2010)

  7. [7]

    van Hecke, Journal of Physics: Condensed Matter22, 033101 (2010)

    M. van Hecke, Journal of Physics: Condensed Matter22, 033101 (2010)

  8. [8]

    Chaudhuri, L

    P. Chaudhuri, L. Berthier, and S. Sastry, Phys. Rev. Lett.104, 165701 (2010)

  9. [9]

    Pontani, I

    L.-L. Pontani, I. Jorjadze, V. Viasnoff, and J. Brujic, Proceedings of the National Academy of Sciences109, 9839 (2012)

  10. [10]

    Yoo and S

    J.-W. Yoo and S. Mitragotri, Proceedings of the National Academy of Sciences107, 11205 (2010)

  11. [11]

    M. L. Manning, Physical Review Letters130, 130002 (2023)

  12. [12]

    Boromand, S

    A. Boromand, S. Jamali, B. Grove, V. Galushko, J. E. Sader, I. Cohen, and N. J. Wagner, Phys. Rev. Lett. 121, 248003 (2018)

  13. [13]

    J. D. Treado, D. Wang, A. Boromand, T. S. Majmudar, and C. S. O’Hern, Phys. Rev. Materials5, 055605 (2021)

  14. [14]

    Pellet and M

    C. Pellet and M. Cloitre, Soft matter12, 3710 (2016)

  15. [15]

    Gnan and E

    N. Gnan and E. Zaccarelli, Nature Physics15, 683 (2019)

  16. [16]

    N. Gnan, F. Camerin, G. Del Monte, A. Ninarello, and E. Zaccarelli, The Journal of Chemical Physics154 (2021)

  17. [17]

    Ghosh, S

    S. Ghosh, S. Vemparala, and P. Chaudhuri, The Journal of Chemical Physics160, 014906 (2024)

  18. [18]

    Nayak, P

    R. Nayak, P. Chaudhuri, and S. Vemparala, Soft Matter 22, 145 (2026)

  19. [19]

    Bose and S

    P. Bose and S. Karmakar, arXiv preprint arXiv:2512.00212 (2025)

  20. [20]

    Pasupalak, Z

    A. Pasupalak, Z. Wu, and M. P. Ciamarra, arXiv preprint arXiv:2409.16128 (2024)

  21. [21]

    Kumar, W

    J. Kumar, W. Zeng, A. Pasupalak, and M. P. Ciamarra, arXiv preprint arXiv:2511.15195 (2025)

  22. [22]

    Poincloux and K

    S. Poincloux and K. A. Takeuchi, Proceedings of the Na- tional Academy of Sciences121, e2408706121 (2024)

  23. [23]

    Arora, S

    P. Arora, S. Sadhukhan, S. K. Nandi, D. Bi, A. Sood, and R. Ganapathy, Nature Communications15, 5645 (2024)

  24. [24]

    Ghosh, R

    S. Ghosh, R. Nayak, S. Vemparala, and P. Chaudhuri, Soft Matter21, 1286 (2025)

  25. [25]

    Bose and S

    P. Bose and S. Karmakar, arXiv preprint arXiv:2603.04075 (2026)

  26. [26]

    Cantor, M

    D. Cantor, M. C´ ardenas-Barrantes, I. Preechawuttipong, M. Renouf, and E. Az´ ema, Physical Review Letters124, 208003 (2020)

  27. [27]

    D. Bi, J. Lopez, J. M. Schwarz, and M. L. Manning, Nature Physics11, 1074 (2015)

  28. [28]

    Henkes, K

    S. Henkes, K. Kostanjevec, J. M. Collinson, R. Sknepnek, and E. Bertin, Nature communications11, 1405 (2020)

  29. [29]

    Sadhukhan and S

    S. Sadhukhan and S. K. Nandi, Elife11, e76406 (2022)

  30. [30]

    Regev, T

    I. Regev, T. Lookman, and C. Reichhardt, Phys. Rev. E88, 062401 (2013)

  31. [31]

    J. D. Paulsen, N. C. Keim, and S. R. Nagel, Phys. Rev. Lett.113, 068301 (2014)

  32. [32]

    Mukherji, N

    S. Mukherji, N. Kandula, A. Sood, and R. Ganapathy, Physical review letters122, 158001 (2019)

  33. [33]

    N. C. Keim, J. D. Paulsen, Z. Zeravcic, S. Sastry, and S. R. Nagel, Reviews of Modern Physics91, 035002 (2019)

  34. [34]

    Shohat, D

    D. Shohat, D. Hexner, and Y. Lahini, Proceedings of the National Academy of Sciences119, e2200028119 (2022)

  35. [35]

    Adhikari, R

    M. Adhikari, R. Sharma, and S. Karmakar, Physical Review Letters134, 018202 (2025)

  36. [36]

    Fiocco, G

    D. Fiocco, G. Foffi, and S. Sastry, Physical Review Let- ters112, 025702 (2014)

  37. [37]

    Kumar, S

    D. Kumar, S. Patinet, C. E. Maloney, I. Regev, D. Van- dembroucq, and M. Mungan, The Journal of Chemical Physics157(2022)

  38. [38]

    Mungan, E

    M. Mungan, E. Cl´ ement, D. Vandembroucq, and S. Sas- try, Annual Review of Condensed Matter Physics17, 207 (2026)

  39. [39]

    Szulc, M

    A. Szulc, M. Mungan, and I. Regev, The Journal of Chemical Physics156, 164506 (2022)

  40. [40]

    Mungan, S

    M. Mungan, S. Sastry, K. Dahmen, and I. Regev, Phys- ical Review Letters123, 178002 (2019)

  41. [41]

    Smrek, I

    J. Smrek, I. Chubak, C. N. Likos, and K. Kremer, Nature communications11, 26 (2020)

  42. [42]

    Two rings are deemed to be in contact if there is at least one monomer-monomer contact between them

  43. [43]

    R. S. Hoy, Physical Review Letters118, 068002 (2017)

  44. [44]

    C. Zhao, K. Tian, and N. Xu, Physical review letters 106, 125503 (2011)

  45. [45]

    Bandi, M

    M. Bandi, M. Rivera, F. Krzakala, and R. Ecke, Phys- ical Review E—Statistical, Nonlinear, and Soft Matter Physics87, 042205 (2013)

  46. [46]

    Bandi, H

    M. Bandi, H. E. Hentschel, I. Procaccia, S. Roy, and J. Zylberg, Europhysics Letters122, 38003 (2018)

  47. [47]

    Halperin and D

    B. Halperin and D. R. Nelson, Physical Review Letters 41, 121 (1978)