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arxiv: 2508.20906 · v3 · pith:F3CAILQQnew · submitted 2025-08-28 · 💻 cs.LG

Turning Tabular Foundation Models into Graph Foundation Models

classification 💻 cs.LG
keywords foundationgraphmodelstabulargfmslearningfeaturesg2t-fm
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While foundation models have revolutionized fields such as natural language processing and computer vision, their potential in graph machine learning remains largely unexplored. One of the key challenges in designing graph foundation models (GFMs) is handling diverse node features that can vary across different graph datasets. While many works on GFMs have focused exclusively on text-attributed graphs, the problem of handling arbitrary features of other types in GFMs has not been fully addressed. However, this problem is not unique to the graph domain, as it also arises in the field of machine learning for tabular data. In this work, motivated by the recent success of tabular foundation models (TFMs) like TabPFNv2 and LimiX, we propose G2T-FM, a simple framework that allows tabular foundation models to be applied to graph node-level tasks. Specifically, G2T-FM augments the original node features with neighborhood feature aggregation, adds structural embeddings, and then applies a TFM to the constructed node representations. Even in the in-context learning setting, our model achieves strong results when combined with a strong TFM, outperforming both prior GFMs and well-tuned GNNs trained from scratch. Moreover, after finetuning, G2T-FM consistently surpasses well-tuned GNN baselines, often by a significant margin. In summary, our paper reveals the potential of a previously overlooked direction: utilizing tabular foundation models for graph machine learning tasks.

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Cited by 4 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score.

  1. Decoupled and Divergence-Conditioned Prompt for Multi-domain Dynamic Graph Foundation Models

    cs.LG 2026-05 conditional novelty 7.0

    DyGFM introduces decoupled pre-training and divergence-conditioned prompts to create the first multi-domain dynamic graph foundation model that outperforms baselines on node classification and link prediction.

  2. TabPFN-3: Technical Report

    cs.LG 2026-05 unverdicted novelty 6.0

    TabPFN-3 delivers state-of-the-art tabular prediction performance on benchmarks up to 1M rows, is up to 20x faster than prior versions, and introduces test-time scaling that beats non-TabPFN models by hundreds of Elo points.

  3. KumoRFM-2: Scaling Foundation Models for Relational Learning

    cs.LG 2026-04 unverdicted novelty 6.0

    KumoRFM-2 pre-trains on synthetic and real relational data across row, column, foreign-key and cross-sample axes, injects task information early, and achieves up to 8% gains over supervised baselines on 41 benchmarks ...

  4. TabPFN-2.5: Advancing the State of the Art in Tabular Foundation Models

    cs.LG 2025-11 unverdicted novelty 6.0

    TabPFN-2.5 scales tabular foundation models to 20x larger datasets, outperforms tuned tree models on TabArena, achieves near-perfect win rates against default XGBoost, and adds a distillation engine for fast productio...