Paper Citation Record · LEDGER

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration

As of 19 August 2026, this Paper Citation Record lists 20 of 20 outbound references and 1 inbound Pith citation observation for arXiv:2501.16382.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2501.16382 v1

Coverage vector

measured 20 of 20 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-10T14:57:05.790742Z

measured 21 of 21 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-18T06:34:40.430872+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-07T13:24:25.126135Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-07T13:24:26.418043Z

Reference resolution

20 of 20 outbound references displayed

verified exact0
verified fuzzy11
unresolved6
parse uncertain0
malformed identifier0
metadata mismatch3

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 7fc6d7f8-62fb-464f-aebd-7a5d20323023 · outbound

This paper cites Consider the direction of the interaction and always and only consider the impact of the direct last protein.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Consider the direction of the interaction and always and only consider the impact of the direct last protein

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:06.007241Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation d4823196-deb2-4e1d-83aa-577361953ad1 · outbound

This paper cites If you can not find any explict reasons to indicate that they are relevant, the path will be irrelevant.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration If you can not find any explict reasons to indicate that they are relevant, the path will be irrelevant

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.988064Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 86895136-e4b5-40e0-8aef-1cb1472f5986 · outbound

This paper cites BiomedRAG: A Retrieval Augmented Large Language Model for Biomedicine.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration BiomedRAG: A Retrieval Augmented Large Language Model for Biomedicine

Reference 4

Resolution: metadata mismatch; local_arxiv, observed 2026-08-10T14:57:05.875362Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 6b66f7f5-740f-431f-a1c7-0c776aee05c8 · outbound

This paper cites an unresolved cited work.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Unresolved cited work

Reference 5

Resolution: unresolved; raw_fallback, observed 2026-08-10T14:57:05.967912Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 6e64a226-9ac3-401e-8831-6a6e21064a3e · outbound

This paper cites ODA: Observation-Driven Agent for integrating LLMs and Knowledge Graphs.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration ODA: Observation-Driven Agent for integrating LLMs and Knowledge Graphs

Reference 6

Resolution: metadata mismatch; local_arxiv, observed 2026-08-10T14:57:05.852489Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 24bada65-6024-4145-a632-489a875b104c · outbound

This paper cites BioRAG: A RAG-LLM Framework for Biological Question Reasoning.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration BioRAG: A RAG-LLM Framework for Biological Question Reasoning

Reference 7

Resolution: unresolved; no resolver link, observed 2026-08-10T14:57:05.744313Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e1727869-8ded-4763-85cf-4d35d738ad23 · outbound

This paper cites Boosting Language Models Reasoning with Chain-of-Knowledge Prompting.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Boosting Language Models Reasoning with Chain-of-Knowledge Prompting

Reference 8

Resolution: unresolved; no resolver link, observed 2026-08-10T14:57:05.748212Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 9481cab1-a5b1-407f-ad11-d89019034c5c · outbound

This paper cites If not, the edge does not make any sense and the relevance is zero.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration If not, the edge does not make any sense and the relevance is zero

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.977956Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation f5282a52-873b-4bbf-8cdf-6f553acb88c9 · outbound

This paper cites Protein A -> Protein B -> Protein C means that protein c can influence protein b and protein b can influence protein a.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Protein A -> Protein B -> Protein C means that protein c can influence protein b and protein b can influence protein a

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.958479Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 99387310-d6d3-4b79-8415-631f3cce9bf0 · outbound

This paper cites The more likely the requirements get satisfied, the higher the relevance score is.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration The more likely the requirements get satisfied, the higher the relevance score is

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.947849Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 60cc19c8-cbb2-4fb1-b54b-ac403270fda0 · outbound

This paper cites If not, the interaction is not relevant.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration If not, the interaction is not relevant

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.997497Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation dd52f26a-b564-43df-8acf-364874fde1f3 · outbound

This paper cites If you can not find any explict reasons to indicate that they are relevant, the path will be irrelevant.

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.938289Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation e553413a-80d0-4021-8bd4-6dfd0ab22e69 · outbound

This paper cites This score will be used to rank the paths according to their relevance of the explanation to the query.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration This score will be used to rank the paths according to their relevance of the explanation to the query

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.928609Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation dac96fac-8c4e-4f94-a6b8-b96225f52995 · outbound

This paper cites If not, the path does not make any sense and the relevance is zero.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration If not, the path does not make any sense and the relevance is zero

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.918372Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation cdc740b9-1a92-41ee-af4f-97c880408429 · outbound

This paper cites explanation.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration explanation

Reference 21

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:05.908531Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation ec81d348-1188-4734-b230-95de71a32a5c · outbound

This paper cites ProtoTEx: Explaining Model Decisions with Prototype Tensors.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration ProtoTEx: Explaining Model Decisions with Prototype Tensors

Reference 2015

Resolution: metadata mismatch; local_arxiv, observed 2026-08-10T14:57:05.898155Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 8860c387-b547-441e-866a-1179580ddc7a · outbound

This paper cites Recommender Systems in the Era of Large Language Models (LLMs).

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Recommender Systems in the Era of Large Language Models (LLMs)

Reference 2020

Resolution: unresolved; no resolver link, observed 2026-08-10T14:57:05.751654Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c74eb6c4-5ff9-45d8-916a-5f207499ad82 · outbound

This paper cites Large Language Models Help Humans Verify Truthfulness -- Except When They Are Convincingly Wrong.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Large Language Models Help Humans Verify Truthfulness -- Except When They Are Convincingly Wrong

Reference 2023

Resolution: unresolved; no resolver link, observed 2026-08-10T14:57:05.737005Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 5cab6840-5d02-48e5-91be-456071d70a93 · outbound

This paper cites LongRAG: Enhancing Retrieval-Augmented Generation with Long-context LLMs.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration LongRAG: Enhancing Retrieval-Augmented Generation with Long-context LLMs

Reference 2024

Resolution: unresolved; no resolver link, observed 2026-08-10T14:57:05.729362Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 441b9068-cb89-4f0a-a96f-5d19037f2be7 · outbound

This paper cites Jurgen Drews.

GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration Jurgen Drews

Reference 4186

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T14:57:06.016812Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Pith citing papers

Observation 2346e570-5ff9-4d55-a65e-bc4ae44758c3 · inbound

RAGPPI: RAG Benchmark for Protein-Protein Interactions in Drug Discovery cites this paper.

RAGPPI: RAG Benchmark for Protein-Protein Interactions in Drug Discovery GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration

Reference 14

Resolution: verified exact; local_arxiv, observed 2026-08-07T13:24:26.469494Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.