Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling | Paper Citation Record

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This paper cites write newline.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling write newline

Reference 1

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This paper cites J., Bambrick, J., et al.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling J., Bambrick, J., et al

Reference 2

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This paper cites F., Leaver-Fay, A., Jeliazkov, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling F., Leaver-Fay, A., Jeliazkov, J

Reference 3

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Observation a9b3c302-276c-4280-96b7-46dbbf6648fa · outbound

This paper cites R., Wang, J., Cong, Q., Kinch, L.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling R., Wang, J., Cong, Q., Kinch, L

Reference 4

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This paper cites M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T

Reference 5

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This paper cites K., Bahl, C.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling K., Bahl, C

Reference 6

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This paper cites A., Mulligan, V.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling A., Mulligan, V

Reference 7

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Observation 6210c752-9b37-4a35-92dd-bb5d89de4343 · outbound

This paper cites Score-Based Generative Models for Designing Binding Peptide Backbones.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Score-Based Generative Models for Designing Binding Peptide Backbones

Reference 8

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Observation ad14c263-f10e-4285-abf8-14e5b6b1ac0b · outbound

This paper cites K., Rahimi, M.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling K., Rahimi, M

Reference 9

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This paper cites K., Bhikadiya, C., Bi, C., Bittrich, S., Chao, H., Chen, L., Craig, P.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling K., Bhikadiya, C., Bi, C., Bittrich, S., Chao, H., Chen, L., Craig, P

Reference 10

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Observation cdeb6484-7d7c-4c93-aa5d-21f7da0e784a · outbound

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 11

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Observation 8cad5717-98db-4bd3-8f64-227093a86db2 · outbound

This paper cites Generative flows on discrete state-spaces: Enabling multimodal flows with applications to protein co-design.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Generative flows on discrete state-spaces: Enabling multimodal flows with applications to protein co-design

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:54.984861Z

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Observation 7865538f-e80e-4b20-9dc7-7702a66fe0a6 · outbound

This paper cites Surfdock is a surface-informed diffusion generative model for reliable and accurate protein--ligand complex prediction.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Surfdock is a surface-informed diffusion generative model for reliable and accurate protein--ligand complex prediction

Reference 13

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:55.098243Z

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Observation a9889472-e119-448d-ae9c-f3f4b826e285 · outbound

This paper cites S., Jude, K.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling S., Jude, K

Reference 14

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This paper cites E., Pavel, M., \'C wik a, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling E., Pavel, M., \'C wik a, J

Reference 15

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Observation bf379e50-6d0c-4bfd-9fd4-5e5deafae3eb · outbound

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 16

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Observation 9ac0049f-cb6a-4540-beb9-aebe4311f5bf · outbound

This paper cites An all-atom generative model for designing protein complexes.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling An all-atom generative model for designing protein complexes

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:55.553167Z

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Observation 1148fb78-1576-4946-9b91-1b3293f70897 · outbound

This paper cites Pep MLM : Target sequence-conditioned generation of peptide binders via masked language modeling.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Pep MLM : Target sequence-conditioned generation of peptide binders via masked language modeling

Reference 18

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:55.682334Z

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Observation 9b2b80dd-1b71-42a2-a118-057bb4a6941b · outbound

This paper cites Decomposed direct preference optimization for structure-based drug design.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Decomposed direct preference optimization for structure-based drug design

Reference 19

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:55.801652Z

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Observation 5528f26d-7dbb-4df2-af98-0d65464b01cf · outbound

This paper cites E., Kim, J., Cheng, L., El Nesr, G., Xu, M., Shuai, R.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling E., Kim, J., Cheng, L., El Nesr, G., Xu, M., Shuai, R

Reference 20

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Observation 6d5a2b9f-2353-433d-bc32-c498b97dba58 · outbound

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 21

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Observation af0e3190-c7a1-45fc-a39b-09ab4e49dbbd · outbound

This paper cites Cyclic peptides in pipeline: what future for these great molecules? Pharmaceuticals, 16 0 (7): 0 996, 2023.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Cyclic peptides in pipeline: what future for these great molecules? Pharmaceuticals, 16 0 (7): 0 996, 2023

Reference 22

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:56.038489Z

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Observation e13fddaf-d036-408d-8d26-4fadabdba3db · outbound

This paper cites S., and Trievel, R.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling S., and Trievel, R

Reference 23

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Observation 26ec4e49-1d35-409d-bbdc-f3848fe4d482 · outbound

This paper cites J., Milles, L.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling J., Milles, L

Reference 24

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Observation 43fea840-3711-4092-804c-f1089cf0ffc9 · outbound

This paper cites and Nichol, A.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling and Nichol, A

Reference 25

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Observation 7619e84c-2477-4d11-b31f-2b6fba905dbe · outbound

This paper cites J., Czodrowski, P., Li, H., Nielsen, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling J., Czodrowski, P., Li, H., Nielsen, J

Reference 26

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:56.386886Z

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This paper cites M., Hale, S.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling M., Hale, S

Reference 27

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This paper cites F., and Forli, S.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling F., and Forli, S

Reference 28

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This paper cites an unresolved cited work.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 29

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:56.681454Z

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This paper cites Disulfide bonding in protein biophysics.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Disulfide bonding in protein biophysics

Reference 30

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Observation 10efc69b-9805-4ca0-955a-c1970b6ad4f0 · outbound

This paper cites A., Banks, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling A., Banks, J

Reference 31

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 32

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Observation dff356a5-6c6c-4602-ab7f-8915dfb9ff78 · outbound

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 33

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This paper cites Macrocycles in drug discovery-learning from the past for the future.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Macrocycles in drug discovery-learning from the past for the future

Reference 34

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This paper cites and Kihlberg, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling and Kihlberg, J

Reference 35

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This paper cites W., Ma, W.-Y., Ma, J., and Peng, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling W., Ma, W.-Y., Ma, J., and Peng, J

Reference 36

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:57.575052Z

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This paper cites Group Ligands Docking to Protein Pockets.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Group Ligands Docking to Protein Pockets

Reference 37

Resolution: verified exact; local_arxiv, observed 2026-08-07T13:40:18.118220Z

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Observation 8b994e75-2136-4daf-bf8a-75732d944c8f · outbound

This paper cites Classifier-Free Diffusion Guidance.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Classifier-Free Diffusion Guidance

Reference 38

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Observation 22719b0f-9a0b-43d9-aff0-6f52dbed95f0 · outbound

This paper cites Denoising diffusion probabilistic models.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Denoising diffusion probabilistic models

Reference 39

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This paper cites W., Le Grand, S., Walker, R.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling W., Le Grand, S., Walker, R

Reference 40

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This paper cites R., Craven, T.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling R., Craven, T

Reference 41

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This paper cites Learning inverse folding from millions of predicted structures.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Learning inverse folding from millions of predicted structures

Reference 42

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 43

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This paper cites Generative models for graph-based protein design.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Generative models for graph-based protein design

Reference 44

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:58.453465Z

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This paper cites Structural insights into estrogen receptor methylation by histone methyltransferase smyd2, a cellular event implicated in estrogen signaling regulation.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Structural insights into estrogen receptor methylation by histone methyltransferase smyd2, a cellular event implicated in estrogen signaling regulation

Reference 45

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:58.599531Z

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Observation 26ffaa05-7ead-4052-ba43-e61422205794 · outbound

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Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 46

Resolution: unresolved; raw_fallback, observed 2026-08-07T13:40:26.953884Z

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Observation 42f696b0-f39c-4517-96a0-9b37ad0d13e0 · outbound

This paper cites an unresolved cited work.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 47

Resolution: unresolved; raw_fallback, observed 2026-08-07T13:40:26.754838Z

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Observation 6c5dcc09-3aa8-4eda-921a-ef21ef20db65 · outbound

This paper cites an unresolved cited work.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 48

Resolution: unresolved; raw_fallback, observed 2026-08-07T13:40:26.458120Z

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Observation fbaa6d0e-e0c5-4bc0-88c2-4463e5eeecad · outbound

This paper cites L., Chandrasekhar, J., Madura, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling L., Chandrasekhar, J., Madura, J

Reference 49

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:58.752640Z

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This paper cites S., Villequey, C., Kong, X.-D., Zorzi, A., Deyle, K., and Heinis, C.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling S., Villequey, C., Kong, X.-D., Zorzi, A., Deyle, K., and Heinis, C

Reference 50

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:26.176476Z

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This paper cites N., Passioura, T., et al.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling N., Passioura, T., et al

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Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:25.906757Z

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Observation 7afd6c03-3d94-433a-9d7c-4c7d93260f63 · outbound

This paper cites End-to-end full-atom antibody design.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling End-to-end full-atom antibody design

Reference 52

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:25.726467Z

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Observation 2cf0f7aa-842d-42aa-9fc1-7418eaf3b0d4 · outbound

This paper cites Full-atom peptide design with geometric latent diffusion.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Full-atom peptide design with geometric latent diffusion

Reference 53

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:25.526438Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 2e383179-6846-4ade-9ac3-2ceefa8c5aae · outbound

This paper cites R., Morey-Burrows, F.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling R., Morey-Burrows, F

Reference 54

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:59.146719Z

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Observation 42537ca8-f06c-4359-994a-c0a257a90dbb · outbound

This paper cites Improving Antibody Design with Force-Guided Sampling in Diffusion Models.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Improving Antibody Design with Force-Guided Sampling in Diffusion Models

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Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:59.226923Z

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Observation cda7e92e-5163-4f47-9205-7fc6fe1c1725 · outbound

This paper cites Full-atom peptide design based on multi-modal flow matching.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Full-atom peptide design based on multi-modal flow matching

Reference 56

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:25.368038Z

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No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 643f10d4-596a-4265-a375-9402546072b7 · outbound

This paper cites Delineating the stepwise millisecond allosteric activation mechanism of the class c gpcr dimer mglu5.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Delineating the stepwise millisecond allosteric activation mechanism of the class c gpcr dimer mglu5

Reference 57

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:25.184480Z

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No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation de1dd2f1-0ea9-4607-afd6-50ae9ca25c3e · outbound

This paper cites an unresolved cited work.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 58

Resolution: unresolved; raw_fallback, observed 2026-08-07T13:40:25.004059Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation bbb03d23-bbb0-4e5c-a46e-8b361368185f · outbound

This paper cites Evolutionary-scale prediction of atomic-level protein structure with a language model.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Evolutionary-scale prediction of atomic-level protein structure with a language model

Reference 59

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:59.801053Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 815ad384-d20f-4729-bca6-b093d64b46b0 · outbound

This paper cites L., Gershon, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling L., Gershon, J

Reference 60

Resolution: unresolved; no resolver link, observed 2026-08-07T13:35:59.918670Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 9c905ab0-8ddc-4e66-bd2a-2386c33b1c46 · outbound

This paper cites Cyclicpepedia: a knowledge base of natural and synthetic cyclic peptides.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Cyclicpepedia: a knowledge base of natural and synthetic cyclic peptides

Reference 61

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:24.848627Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 2aaf24ea-9b1d-43b1-b44f-fb194d7ee557 · outbound

This paper cites Decoupled Weight Decay Regularization.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Decoupled Weight Decay Regularization

Reference 62

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:00.099185Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 8bb85e8a-fac6-4de0-8074-6ae914de4975 · outbound

This paper cites Contrastive energy prediction for exact energy-guided diffusion sampling in offline reinforcement learning.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Contrastive energy prediction for exact energy-guided diffusion sampling in offline reinforcement learning

Reference 63

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:24.738507Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation e48cbfac-9c37-4426-a5ec-e736b79fed72 · outbound

This paper cites Tankbind: Trigonometry-aware neural networks for drug-protein binding structure prediction.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Tankbind: Trigonometry-aware neural networks for drug-protein binding structure prediction

Reference 64

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:00.332395Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 2b835502-e4f3-4b83-9a3e-b018f886e095 · outbound

This paper cites G., and Zheng, S.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling G., and Zheng, S

Reference 65

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:24.572219Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 05b3a59c-4e84-439b-b277-dfd930338f63 · outbound

This paper cites Antigen-specific antibody design and optimization with diffusion-based generative models for protein structures.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Antigen-specific antibody design and optimization with diffusion-based generative models for protein structures

Reference 66

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:00.517843Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 53c76035-53b7-4aab-8247-dd911506cf3f · outbound

This paper cites R., Subramanian, S., Mohr, B.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling R., Subramanian, S., Mohr, B

Reference 67

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:00.614497Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 009886d3-78f5-486d-ba88-330b0aabc8e4 · outbound

This paper cites A., Martinez, C., Kasavajhala, K., Wickstrom, L., Hauser, K.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling A., Martinez, C., Kasavajhala, K., Wickstrom, L., Hauser, K

Reference 68

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:00.744102Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b64d0bbb-6dd0-4703-ab12-e1907ab0b2fd · outbound

This paper cites K., Wang, T., Zupancic, J.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling K., Wang, T., Zupancic, J

Reference 69

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:24.410554Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 21f9b87f-25e5-4a8f-ad41-b763d9366da1 · outbound

This paper cites Y., Chen, H., and Shen, C.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Y., Chen, H., and Shen, C

Reference 70

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:24.252822Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 1d7f6cdb-e617-4434-8b12-fdad0fd96104 · outbound

This paper cites Abdiffuser: full-atom generation of in-vitro functioning antibodies.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Abdiffuser: full-atom generation of in-vitro functioning antibodies

Reference 71

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:24.100061Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 00d4cf98-80f7-4ce8-b99e-f6c7d2327228 · outbound

This paper cites C., Bastos, L.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling C., Bastos, L

Reference 72

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:23.864143Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 1e46d337-c8e5-44bc-8ea8-458fee8b57cc · outbound

This paper cites L., Habeshian, S., Li, B., David, J.-A.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling L., Habeshian, S., Li, B., David, J.-A

Reference 73

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:23.636597Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 6f2d55d5-aa6e-47be-9874-005d205fba93 · outbound

This paper cites and Suga, H.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling and Suga, H

Reference 74

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:23.527007Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 72e6c512-94b6-433a-a367-1a106f6ec051 · outbound

This paper cites Fabind: Fast and accurate protein-ligand binding.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Fabind: Fast and accurate protein-ligand binding

Reference 75

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:01.581296Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c2392c3e-21da-4862-b9ff-b4c02b8c7da0 · outbound

This paper cites and Zhou, M.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling and Zhou, M

Reference 76

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:23.368022Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation cbb48981-005a-423f-82a8-6fd3484bc125 · outbound

This paper cites F., and Anandkumar, A.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling F., and Anandkumar, A

Reference 77

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:01.936849Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ae793358-5e04-4a77-8f3e-4946d6eba5d0 · outbound

This paper cites F., Zhao, Q., Leveille, A., Liu, A., Bera, A., Wilms, J., \"U ffing, A., et al.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling F., Zhao, Q., Leveille, A., Liu, A., Bera, A., Wilms, J., \"U ffing, A., et al

Reference 78

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.080772Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 7291c95b-31a6-4c75-a896-b4778c5579fc · outbound

This paper cites L., Ma, J., et al.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling L., Ma, J., et al

Reference 79

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.196108Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 1f85abcf-7cf1-4230-918e-ac6b6ee05533 · outbound

This paper cites an unresolved cited work.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 80

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.288106Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation cc93fb67-8ddf-4b23-8d68-0a6e7a893449 · outbound

This paper cites W., Poole, D., Le Grand, S., and Walker, R.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling W., Poole, D., Le Grand, S., and Walker, R

Reference 81

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.394307Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 398ea7dc-2895-4bda-b6a2-af58dad95a3b · outbound

This paper cites and Solin, A.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling and Solin, A

Reference 82

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.479857Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 359c2c7b-24ab-427f-aa84-58236dc2ad00 · outbound

This paper cites G., Hoogeboom, E., and Welling, M.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling G., Hoogeboom, E., and Welling, M

Reference 83

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.652772Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 7459f127-a11f-459d-ba0f-b114db7efa4b · outbound

This paper cites K., Sharma, A., and Jain, R.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling K., Sharma, A., and Jain, R

Reference 84

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:23.190666Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 88fa483e-f125-4481-ab00-65b947f7d72a · outbound

This paper cites and Ermon, S.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling and Ermon, S

Reference 85

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.901873Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b763cd8c-6db6-44cf-aaae-b472e5b2ab73 · outbound

This paper cites P., Kumar, A., Ermon, S., and Poole, B.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling P., Kumar, A., Ermon, S., and Poole, B

Reference 86

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:02.956966Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 30332dde-ef0d-4f7f-b292-3a573539a700 · outbound

This paper cites Equibind: Geometric deep learning for drug binding structure prediction.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Equibind: Geometric deep learning for drug binding structure prediction

Reference 87

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:03.052785Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 66c5cbae-b775-4653-b838-cc496caf56b5 · outbound

This paper cites Harmonic prior self-conditioned flow matching for multi-ligand docking and binding site design.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Harmonic prior self-conditioned flow matching for multi-ligand docking and binding site design

Reference 88

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:23.018678Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 4e317122-d101-4d22-808d-087e2bd15e3e · outbound

This paper cites Peptune: De novo generation of therapeutic peptides with multi-objective-guided discrete diffusion.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Peptune: De novo generation of therapeutic peptides with multi-objective-guided discrete diffusion

Reference 89

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:22.892682Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 1cae6f29-6cdb-4f72-9610-61348f48b32d · outbound

This paper cites K., Avraham, O., Ben-Aharon, Z., Khramushin, A., and Schueler-Furman, O.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling K., Avraham, O., Ben-Aharon, Z., Khramushin, A., and Schueler-Furman, O

Reference 90

Resolution: unresolved; no resolver link, observed 2026-08-07T13:36:03.401347Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bda0d1be-f42d-42b9-b488-ac701bd1601e · outbound

This paper cites Peptide therapeutics: targeting the undruggable space.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Peptide therapeutics: targeting the undruggable space

Reference 91

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:22.761133Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation dfca12b5-07d5-4911-ad8e-1c9260aee78a · outbound

This paper cites an unresolved cited work.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Unresolved cited work

Reference 92

Resolution: unresolved; raw_fallback, observed 2026-08-07T13:40:22.621479Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation d6cada4d-a122-4f9f-930d-3d2286d336df · outbound

This paper cites A., Yin, Y., and Suga, H.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling A., Yin, Y., and Suga, H

Reference 93

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:22.470722Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 2279dd57-b781-4e74-9593-f556dfb1d6bb · outbound

This paper cites Z., and Hou, T.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Z., and Hou, T

Reference 94

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:22.320517Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 9783d36d-e74b-4b65-bed3-a619318d5593 · outbound

This paper cites Target-specific de novo peptide binder design with diffpepbuilder.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Target-specific de novo peptide binder design with diffpepbuilder

Reference 95

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:22.168144Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 3e195099-dae6-4d1f-bdc4-9599ee1fbedd · outbound

This paper cites The pdbbind database: methodologies and updates.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling The pdbbind database: methodologies and updates

Reference 96

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:22.016497Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation 728e2c23-184d-4622-89f1-598bd397e5bf · outbound

This paper cites Diffusion language models are versatile protein learners.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Diffusion language models are versatile protein learners

Reference 97

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:21.881415Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation ef75fbeb-51e3-4bb2-a334-a6bc31f1d104 · outbound

This paper cites Dplm-2: A multimodal diffusion protein language model.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Dplm-2: A multimodal diffusion protein language model

Reference 98

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:21.707799Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

Observation ace33cca-030a-4534-bf4a-678855c088a5 · outbound

This paper cites L., Juergens, D., Bennett, N.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling L., Juergens, D., Bennett, N

Reference 99

Resolution: unresolved; no resolver link, observed 2026-08-07T13:40:15.006276Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 2ac81bcc-686a-4280-94c7-425f1416e31a · outbound

This paper cites Q-biolip: A comprehensive resource for quaternary structure-based protein--ligand interactions.

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Q-biolip: A comprehensive resource for quaternary structure-based protein--ligand interactions

Reference 100

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T13:40:21.537481Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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