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Paper Citation Record · LEDGER

Design-CP: Context Parallelism for Design of Protein Nanoparticles

As of 12 August 2026, this Paper Citation Record lists 100 of 132 outbound references and 0 inbound Pith citation observations for arXiv:2607.05439.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2607.05439 v1

Coverage vector

measured 100 of 132 reference resolution

Typed states for the displayed outbound observations.

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measured 100 of 100 standing notices

One-hop event checks from named stored sources.

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measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

100 of 132 outbound references displayed

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External citation measurements

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Outbound references

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This paper cites and Steinegger, Martin and Kucukbenli, Emine and Vahdat, Arash and Kreis, Karsten , month = mar, year =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Steinegger, Martin and Kucukbenli, Emine and Vahdat, Arash and Kreis, Karsten , month = mar, year =

Reference 1

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Observation fe757269-4243-4c85-a9e5-86db24492c76 · outbound

This paper cites Boltz-2:.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Boltz-2:

Reference 2

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Observation eb2af0ad-2cef-427c-bcb7-fb126fef8ea0 · outbound

This paper cites Science , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Science , author =

Reference 3

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Observation 05f82374-4080-46a1-aa4b-013600abf910 · outbound

This paper cites A framework for conditional diffusion modelling with applications in motif scaffolding for protein design.

Design-CP: Context Parallelism for Design of Protein Nanoparticles A framework for conditional diffusion modelling with applications in motif scaffolding for protein design

Reference 4

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Observation b999e2ac-69dc-4184-930c-a5e109b3ae91 · outbound

This paper cites Fast and.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Fast and

Reference 5

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This paper cites and Guo, Daniel and Viggiano, Ben and Brennan-Almaraz, Lucas and Hur, Evelyn and Mai, Tina and Yin, Peter and King, Samuel H.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Guo, Daniel and Viggiano, Ben and Brennan-Almaraz, Lucas and Hur, Evelyn and Mai, Tina and Yin, Peter and King, Samuel H

Reference 6

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This paper cites and Schaeffer, R.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Schaeffer, R

Reference 7

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This paper cites and Baranov, Max and Costello, Zak and Barber, Karl W.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Baranov, Max and Costello, Zak and Barber, Karl W

Reference 8

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This paper cites and Anishchenko, I.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Anishchenko, I

Reference 9

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Design-CP: Context Parallelism for Design of Protein Nanoparticles 2024 , pages =

Reference 10

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This paper cites and Bambrick, Joshua and Bodenstein, Sebastian W.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Bambrick, Joshua and Bodenstein, Sebastian W

Reference 11

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This paper cites and Lee, Jin Sub and Bruguera, Elise S.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Lee, Jin Sub and Bruguera, Elise S

Reference 12

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Design-CP: Context Parallelism for Design of Protein Nanoparticles , month = dec, year =

Reference 13

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Reference 14

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Design-CP: Context Parallelism for Design of Protein Nanoparticles ProxelGen: Generating Proteins as 3D Densities

Reference 16

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Observation fa94c9f4-d85d-4224-a30d-300543e2e515 · outbound

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Reference 17

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Observation cedfd118-1748-4bf3-ab5c-b85e20b464e9 · outbound

This paper cites Arithmetic in the Wild: Llama uses Base-10 Addition to Reason About Cyclic Concepts.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Arithmetic in the Wild: Llama uses Base-10 Addition to Reason About Cyclic Concepts

Reference 18

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This paper cites doi:10.1101/2025.02.27.640585 , abstract =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles doi:10.1101/2025.02.27.640585 , abstract =

Reference 19

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Reference 20

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Induction Meets Biology: Mechanisms of Repeat Detection in Protein Language Models

Reference 21

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Design-CP: Context Parallelism for Design of Protein Nanoparticles doi:10.64898/2026.04.22.720175 , abstract =

Reference 22

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Design-CP: Context Parallelism for Design of Protein Nanoparticles ProtComposer: Compositional Protein Structure Generation with 3D Ellipsoids

Reference 23

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This paper cites Generative Flows on Discrete State-Spaces: Enabling Multimodal Flows with Applications to Protein Co-Design.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Generative Flows on Discrete State-Spaces: Enabling Multimodal Flows with Applications to Protein Co-Design

Reference 24

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This paper cites Flow Straight and Fast: Learning to Generate and Transfer Data with Rectified Flow.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Flow Straight and Fast: Learning to Generate and Transfer Data with Rectified Flow

Reference 25

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Towards the explainability of protein language models , copyright =

Reference 28

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Denoising Diffusion Probabilistic Models

Reference 30

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Score-Based Generative Modeling through Stochastic Differential Equations

Reference 31

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Towards Interpretable Protein Structure Prediction with Sparse Autoencoders

Reference 32

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Design-CP: Context Parallelism for Design of Protein Nanoparticles GLU Variants Improve Transformer

Reference 33

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Design-CP: Context Parallelism for Design of Protein Nanoparticles and Bale, Jacob B

Reference 34

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Generating Novel, Designable, and Diverse Protein Structures by Equivariantly Diffusing Oriented Residue Clouds

Reference 37

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Design-CP: Context Parallelism for Design of Protein Nanoparticles and Dowling, Quinton and Hsia, Yang and Fries, Chelsea N

Reference 38

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Observation 6712b88c-b529-44d7-87b3-51e4c5d5f696 · outbound

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Sequence Parallelism: Long Sequence Training from System Perspective

Reference 39

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Proteina: Scaling Flow-based Protein Structure Generative Models

Reference 40

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 30b9a613-8f75-4ef4-a57c-86eb52085933 · outbound

This paper cites and Liang, Huazhu and Tam, John and Miletic, Sean and Berman, Jacob M.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Liang, Huazhu and Tam, John and Miletic, Sean and Berman, Jacob M

Reference 41

Resolution
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No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 61c3f0d7-06b6-48b9-b190-6ee413afc534 · outbound

This paper cites an unresolved cited work.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Unresolved cited work

Reference 42

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 02d50893-2f38-4266-bb46-5b22adf24b46 · outbound

This paper cites Nature Methods , publisher =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Nature Methods , publisher =

Reference 43

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unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:24cb15ab5dae95196acb8c1867eb1c7ef5760b7fd29a8089cf21720445dce97b

Observation a55672f4-52e1-4848-bc8f-fbb3082b89ae · outbound

This paper cites Two Stages of Folding: Convergent Mechanisms in AI Protein Folding Trunks.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Two Stages of Folding: Convergent Mechanisms in AI Protein Folding Trunks

Reference 44

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:3e9553cc74f4ae1ca5f1c63314fa998888eb076c14c347f29ec13e66fab4736d

Observation bf2b9818-5aea-4d74-9366-b3fdfd5555b8 · outbound

This paper cites Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding , volume =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding , volume =

Reference 45

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation df8f221f-ef49-4aeb-adc4-971a4c104690 · outbound

This paper cites and Divine, Robby and Miranda, Marcos C.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Divine, Robby and Miranda, Marcos C

Reference 46

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:bd7b9dc1b9f04b9ae7ae975c1595719cd707c3cb31df9f2c92ba0ae00e0c83ed

Observation e5f44afb-0b3e-4b8a-860e-144e56e8901d · outbound

This paper cites and Ueda, George and Fallas, Jorge A.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Ueda, George and Fallas, Jorge A

Reference 47

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.825575Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:eb172837137467306b348dc9317bbfc4c66491099190bd672224ee9346edea85

Observation a50ce301-0965-4759-8306-26a9e8ec4bef · outbound

This paper cites an unresolved cited work.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Unresolved cited work

Reference 48

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:913277599ecf330a3593a6183ed7689c5ca751cea0d36fc4adbffa40a952233a

Observation 9101eb03-5b1b-457f-8944-c8699f2095f4 · outbound

This paper cites Out of Many, One: Designing and Scaffolding Proteins at the Scale of the Structural Universe with Genie 2.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Out of Many, One: Designing and Scaffolding Proteins at the Scale of the Structural Universe with Genie 2

Reference 49

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:f1a93a1cff31082f17fa78c1e53446f101ffbce2990f5a105debec9ad65ccf07

Observation 6dae2f28-3736-446f-a87d-ee74b7ab5615 · outbound

This paper cites SE(3)-Stochastic Flow Matching for Protein Backbone Generation.

Design-CP: Context Parallelism for Design of Protein Nanoparticles SE(3)-Stochastic Flow Matching for Protein Backbone Generation

Reference 50

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:6ce67a30f1d294122ea2352c7242351977254962f55af305b05c2969e40c9c9d

Observation e37cc0a5-3b73-4990-88ee-4cace78422eb · outbound

This paper cites Fast protein backbone generation with SE(3) flow matching.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Fast protein backbone generation with SE(3) flow matching

Reference 51

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:474e3b688336558e91bf4a3f5a7767cd32d12a4eeb29d35466fe5357aa859b0f

Observation 521451ed-0cea-4ccc-b085-36a855dd0d20 · outbound

This paper cites and Grigoryan, Lilit and Navarro, Mary Jane and Catanzaro, Nicholas J.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Grigoryan, Lilit and Navarro, Mary Jane and Catanzaro, Nicholas J

Reference 52

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation f109c34d-317e-4aee-8bd3-1e7d009024c7 · outbound

This paper cites Biotechnology Reports , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Biotechnology Reports , author =

Reference 53

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:fe0100da54ed8bbb099b43914b83cbe8c96cf73dde27e6d977415a4292d00c28

Observation 393206cf-5bc0-431f-997f-bf034327b892 · outbound

This paper cites ACS nano , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles ACS nano , author =

Reference 54

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation da881f62-89f1-4255-a0a7-a3c95b8480cf · outbound

This paper cites an unresolved cited work.

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Reference 55

Resolution
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 5dcfa252-c2ae-4bce-bb6c-7bebcebec552 · outbound

This paper cites bioRxiv: The Preprint Server for Biology , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles bioRxiv: The Preprint Server for Biology , author =

Reference 57

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation bf9e598a-46c4-4496-854e-e2b6e7641276 · outbound

This paper cites , month = dec, year =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles , month = dec, year =

Reference 58

Resolution
unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation fa9450bc-fbe5-4178-a68f-34dab6bc7f5a · outbound

This paper cites Proceedings of the National Academy of Sciences , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Proceedings of the National Academy of Sciences , author =

Reference 60

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:7d87618b8186ddc1571644168f1ae85ae5be55c1bcb790fca18dd1b63f499f8a

Observation f1694bc2-e9c5-4be4-8ea2-dcb828f2b902 · outbound

This paper cites Proceedings of the National Academy of Sciences , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Proceedings of the National Academy of Sciences , author =

Reference 61

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 8c69f81f-1c11-430d-95dd-de0e8df28bd4 · outbound

This paper cites Nature , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Nature , author =

Reference 62

Resolution
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Source-reported events for the cited work

correction dated 2016-10-18. Source: crossref record 10.1038/nature20108->10.1038/nature18010:correction, observed 2026-07-11T03:02:25.73043+00:00. This notice travels one citation hop only.

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Observation 39fa0a1e-36a8-459c-b978-f2608ea19e4e · outbound

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Science , author =

Reference 63

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation d0c3f1bb-137a-43c7-addb-f691f3990beb · outbound

This paper cites Science , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Science , author =

Reference 64

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation f89ab2ac-5e14-4b94-af3f-68cd49e67481 · outbound

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Proceedings of the National Academy of Sciences , author =

Reference 65

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation fa80c06d-188b-4c89-b115-86b14fef553e · outbound

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Design-CP: Context Parallelism for Design of Protein Nanoparticles Bioinformatics , author =

Reference 66

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 8d1e3a04-2688-4e81-9280-f1674bb07dc2 · outbound

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Reference 67

Resolution
unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:59c6c2e12b297a1f8ad7a45fa4f4e21c879884975b4ccb90ed2f5ad0ff36752e

Observation e8840c7b-63d1-4237-8799-7275155db6ef · outbound

This paper cites Predicting the structure of large protein complexes using.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Predicting the structure of large protein complexes using

Reference 68

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation f993399c-33f7-47d9-abfe-d3c61d8a3c1c · outbound

This paper cites an unresolved cited work.

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Reference 69

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:151aec84cf6c208a029d8682451acb6b0f2fe290065fb615849ad467b739f4a4

Observation 1b1de13c-ecb6-40ec-8e2b-b8ba318d603e · outbound

This paper cites Efficient Training of Large Language Models on Distributed Infrastructures: A Survey.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Efficient Training of Large Language Models on Distributed Infrastructures: A Survey

Reference 70

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:34793b6bb6119ae3c2ca9bf9e07641e96d0278a63c2aeee671cf4873a1e77ac6

Observation aa6dbee2-0b55-4b51-9ab2-430b5aabcd7f · outbound

This paper cites FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours.

Design-CP: Context Parallelism for Design of Protein Nanoparticles FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

Reference 71

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:d039d765c1de26f9b939f26cce99dcf864b2491cc1a36c99b44402d02442d972

Observation 100734a7-637b-4833-800d-0d27d27b588a · outbound

This paper cites Self-attention Does Not Need $O(n^2)$ Memory.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Self-attention Does Not Need $O(n^2)$ Memory

Reference 72

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:5df4bd1da386df10edee80748eb66679ca28e651385e7d3f1caa3a057485bdbc

Observation 1f0bf96a-a638-461a-a93e-cb9c9f3bad28 · outbound

This paper cites Thorben and Chmiela, Stefan and Müller, Klaus-Robert and Unke, Oliver T.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Thorben and Chmiela, Stefan and Müller, Klaus-Robert and Unke, Oliver T

Reference 73

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.761932Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:3e60cfb7ac3061e56b52f56d009fd2821801b3a223259093526e8ab77ea5e177

Observation 65435f22-087c-4829-805e-b9e642318c20 · outbound

This paper cites Efficiently Scaling Transformer Inference.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Efficiently Scaling Transformer Inference

Reference 74

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:fbf926609d7c7b48469f276dbae1754cc18110382fe4276e8527a04d0e9fc394

Observation e919841b-30d3-4e66-a2d1-e594d06b6753 · outbound

This paper cites Efficient Large-Scale Language Model Training on GPU Clusters Using Megatron-LM.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Efficient Large-Scale Language Model Training on GPU Clusters Using Megatron-LM

Reference 75

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:086b36c7fda7afb5892f1029fd40b692b5e70d57887d67a90694fa454d982dd9

Observation 01cb9dfc-6779-4e94-a2b5-6beb89836c93 · outbound

This paper cites an unresolved cited work.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Unresolved cited work

Reference 76

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:1d7eac2433b62f9f5db2e8630f6f1c429d4087093534dd9493283e75e3c599ee

Observation f91b891a-8a7b-4047-803d-a284f3f6f7f0 · outbound

This paper cites and Fatehi, Farzad and Mallik, Bhoomika Basu and Antanasijevic, Aleksandar and Borst, Andrew J.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Fatehi, Farzad and Mallik, Bhoomika Basu and Antanasijevic, Aleksandar and Borst, Andrew J

Reference 77

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.752233Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:888e6bcc5c32055c71412e08cc25e96fed267bf5e51246ff0dc7bfb9cf4c256d

Observation d5b73ca1-4810-4203-9ccd-e256e915ea6f · outbound

This paper cites EvoFlows: Evolutionary Edit-Based Flow-Matching for Protein Engineering.

Design-CP: Context Parallelism for Design of Protein Nanoparticles EvoFlows: Evolutionary Edit-Based Flow-Matching for Protein Engineering

Reference 78

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:dcf1f68b2a00072819055a9be4733b184db5cfbcec8a4e89276fa52186c72ca2

Observation 95759b29-3b44-4e0b-9c5b-247c4dd900bf · outbound

This paper cites General Multimodal Protein Design Enables DNA-Encoding of Chemistry.

Design-CP: Context Parallelism for Design of Protein Nanoparticles General Multimodal Protein Design Enables DNA-Encoding of Chemistry

Reference 79

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:f9a59880aa4b22967a21383a8c8153ffee9f9092f1a56d891815c06770a62e37

Observation f25e9031-583d-4daf-a14d-e4a4611af816 · outbound

This paper cites and Kim, Jinho and Cheng, Lucy and El Nesr, Gina and Xu, Minkai and Shuai, Richard W.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Kim, Jinho and Cheng, Lucy and El Nesr, Gina and Xu, Minkai and Shuai, Richard W

Reference 80

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:36d08686e642ef7f92fe9f1bbe42e84631b0a025893d46ab534ad43d214a00de

Observation 11194d6e-114b-474b-8b8b-3ed13c6cccf3 · outbound

This paper cites an unresolved cited work.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Unresolved cited work

Reference 81

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.739033Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:4fe8210db3fada95db90f3ca548b1808fa8effdf550bbe8915ef4a7f32a4358f

Observation 407a6a35-7a37-4de7-86fd-0876c8afd4f1 · outbound

This paper cites All-atom Diffusion Transformers: Unified generative modelling of molecules and materials.

Design-CP: Context Parallelism for Design of Protein Nanoparticles All-atom Diffusion Transformers: Unified generative modelling of molecules and materials

Reference 82

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:b19d1aedefed20f0dd340d8475a9d427f49badeddec1d1f99f67889897ba0063

Observation 6a251f64-1b86-49e0-a592-b0eceee57936 · outbound

This paper cites P(all-atom).

Design-CP: Context Parallelism for Design of Protein Nanoparticles P(all-atom)

Reference 83

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:e96d2d9dd765805a09b4e5b1660eac580fc77ed9789f687af850c5860a98d2ec

Observation e097d5a6-e2e1-4c21-a7b3-31835f422601 · outbound

This paper cites Journal of Structural Biology , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Journal of Structural Biology , author =

Reference 84

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.718267Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:3be061395b4dfe56dbe9adf8a256aa5b58322d64eff1747e1c7791c4a81d2b6a

Observation 9e79ab99-44e8-4887-9aed-ad9b7e0220e2 · outbound

This paper cites Nature Communications , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Nature Communications , author =

Reference 85

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.723578Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:4cf18ea3c73b023cffa0d0e6ce3d4d733ddf68b333995897cc73f5ec98a415cc

Observation 26ae7e6e-7367-446b-9476-2d4ed3d63b12 · outbound

This paper cites doi:10.48550/arXiv.2505.12044 , abstract =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles doi:10.48550/arXiv.2505.12044 , abstract =

Reference 86

Resolution
verified exact
arxiv_id, observed 2026-07-12T02:38:26.010885Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:8b2245250e91cf28137c69d8994ee349cd11eb73fa57df7db5838073fb19c9d6

Observation cdffb5be-e94b-4b13-a4c9-df6175c13c96 · outbound

This paper cites Flash Invariant Point Attention.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Flash Invariant Point Attention

Reference 87

Resolution
metadata mismatch
local_arxiv, observed 2026-07-12T02:38:26.059804Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:17c1beafa81be88ad7d84e9db0e50fa7fceeb2909135616cd7fb6f5ae2a1c08a

Observation 0bf3bdab-5035-429d-ac91-15a58e14d11e · outbound

This paper cites Scalable Diffusion Models with Transformers.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Scalable Diffusion Models with Transformers

Reference 88

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:2eeb2b8f5b8c0e3cacf4e49ab33d8ccf7e98cf246dfb294c416d5517e58b42cb

Observation 4a1eb263-f749-4a54-bc45-d180b5368d4f · outbound

This paper cites doi:10.48550/arXiv.2509.18480 , abstract =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles doi:10.48550/arXiv.2509.18480 , abstract =

Reference 89

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:ed24580dbaf7910f40a54b32cd64b59f10e87c6520cc07f40146d150be99be47

Observation 2dc3df77-3139-4c1f-ade6-9439036ef025 · outbound

This paper cites Online normalizer calculation for softmax.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Online normalizer calculation for softmax

Reference 90

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:493f4ef6ffa39e452a86fc4a37895dd53371a70dbe2676cf3065a1bcad0d966b

Observation bebc5a7d-743e-4461-a89e-eb5eaec27af8 · outbound

This paper cites FlashAttention-2: Faster Attention with Better Parallelism and Work Partitioning.

Design-CP: Context Parallelism for Design of Protein Nanoparticles FlashAttention-2: Faster Attention with Better Parallelism and Work Partitioning

Reference 91

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:6c2ba7f65e755ecbf752b6ea01172443e68696eb9563ddadcc1931e5ebb4c0cf

Observation a2b475d5-8ea5-4579-98ef-6198ea7e2610 · outbound

This paper cites FlashAttention: Fast and Memory-Efficient Exact Attention with IO-Awareness.

Design-CP: Context Parallelism for Design of Protein Nanoparticles FlashAttention: Fast and Memory-Efficient Exact Attention with IO-Awareness

Reference 92

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:5297607ef3f1d034ee62333439351ca7d13df365582d6044526d1a4a2928ba9e

Observation efdfcaa1-eb89-4b92-ac8a-4c38a9955aae · outbound

This paper cites ScaleFold: Reducing AlphaFold Initial Training Time to 10 Hours.

Design-CP: Context Parallelism for Design of Protein Nanoparticles ScaleFold: Reducing AlphaFold Initial Training Time to 10 Hours

Reference 93

Resolution
metadata mismatch
local_arxiv, observed 2026-07-12T02:38:25.904342Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:025dd9346be0282c29a358cfa41d1ae866b2d2f6ba09d202c43890bd742d3545

Observation 387df483-28dd-45e7-9b0f-178730e7946a · outbound

This paper cites Cell , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Cell , author =

Reference 94

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.090839Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:d95961cdfdee78adf96bdf69d36db8a9315ad5c197cfaac57aa59b1de5cc626b

Observation 9819374f-6615-4270-8ef9-2e0937228601 · outbound

This paper cites Nature , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Nature , author =

Reference 95

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.115906Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:e8da66c61b6b60950130f7d1024bad9a3975b0cb2f44fda744b27398897601ce

Observation 2d6e14f4-bea6-4ccd-90f8-3896fb91448a · outbound

This paper cites Science , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Science , author =

Reference 96

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.016828Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:15b347cbb48a8c9b9b1b9aa4f24bf91e7513f4ac26883f60e9e4bae9c92bfcee

Observation 874fb03a-31be-49fe-b01a-813be95963b7 · outbound

This paper cites Annual Review of Biochemistry , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Annual Review of Biochemistry , author =

Reference 97

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.620734Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:60356b72755cac69dbbb562813daa1afc8f2a957efd618052fea258bbce21087

Observation df8d206e-1840-4c22-b882-3edfa3906660 · outbound

This paper cites and Olson, Arthur J.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Olson, Arthur J

Reference 98

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.076941Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:cb9b67a38ff08dcc4c65b7438336a21cb783f5481c21e1473ac34d57c63ce091

Observation 9bce3c8f-3bd7-4e28-8927-c672bc220e34 · outbound

This paper cites and Evans, Declan and Ma, Pengchen and Lee, Gyu Rie and Zhang, Jason Z.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Evans, Declan and Ma, Pengchen and Lee, Gyu Rie and Zhang, Jason Z

Reference 99

Resolution
unresolved
no resolver link, observed 2026-07-12T02:29:52.764344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:6ccc5806cc73ba358a79861ef7176ed7b5cbf0aff71567a14e7888e2a4ac45c1

Observation eff62946-7fa6-4224-a7d3-d09a8c117464 · outbound

This paper cites and Zanghellini, Alexandre and Lovick, Helena M.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Zanghellini, Alexandre and Lovick, Helena M

Reference 100

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.615325Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:dd48e605b8d5f97c1495f835c755ce69a0108fb5de84bea1a772dce041132be4

Observation 90ba3fd7-2bfb-4063-a061-4fb67547ba70 · outbound

This paper cites and Jiang, Lin and DeChancie, Jason and Betker, Jamie and Gallaher, Jasmine L.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Jiang, Lin and DeChancie, Jason and Betker, Jamie and Gallaher, Jasmine L

Reference 101

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.625749Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:c02682f618143bf4434c8cceba938458900ee9de5ccd22339958f6362ce5ea91

Observation cf32e4b8-1bc3-4249-ad2e-4aa7cb1cc629 · outbound

This paper cites Proceedings of the National Academy of Sciences , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Proceedings of the National Academy of Sciences , author =

Reference 102

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.051922Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:522779037300cd6b923f2b7967eca511091bb3b5bf518fe086fa9ffd2590cc13

Observation e953102b-704a-4c21-81f2-73ac86f95f24 · outbound

This paper cites and Watson, Joseph L.

Design-CP: Context Parallelism for Design of Protein Nanoparticles and Watson, Joseph L

Reference 103

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.040990Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:5676a2ef327f51cef5fe300696d9600cfcb6a8cd612b504b885f7ee64ed29dde

Observation 47c3f43c-1ef2-4836-90a5-0b9b10fc94ea · outbound

This paper cites Antigen-.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Antigen-

Reference 104

Resolution
verified exact
doi, observed 2026-07-12T02:38:25.646626Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:46af72488089dbf0a9355e220a4c781c74797cbad370fd8a58622293e7e13615

Observation 6ff6e2ca-4788-403f-885e-6bec894da8ab · outbound

This paper cites Science Translational Medicine , author =.

Design-CP: Context Parallelism for Design of Protein Nanoparticles Science Translational Medicine , author =

Reference 105

Resolution
verified exact
doi, observed 2026-07-12T02:38:26.031225Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=arxiv_source observed=2026-07-12T02:29:52.764344Z digest=sha256:dd0af72e9257736d575ae387c459870de2d6a9e79762fa4d5923bdab393e9f3d

Pith citing papers

No inbound Pith citation observations are available.