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Quantum machine learning using atom-in-molecule-based fragments selected on-the-fly

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arxiv 1707.04146 v5 pith:QG5GVZ7J submitted 2017-07-13 physics.chem-ph

classification physics.chem-ph
keywords quantumlearningchemicalchemistryfragmentsmachinematerialsmodels
verification ladder T0 review T1 audit T2 compute T3 formal

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First principles based exploration of chemical space deepens our understanding of chemistry, and might help with the design of new materials or experiments. Due to the computational cost of quantum chemistry methods and the immens number of theoretically possible stable compounds comprehensive in-silico screening remains prohibitive. To overcome this challenge, we combine atoms-in-molecules based fragments, dubbed "amons" (A), with active learning in transferable quantum machine learning (ML) models. The efficiency, accuracy, scalability, and transferability of resulting AML models is demonstrated for important molecular quantum properties, such as energies, forces, atomic charges NMR shifts, polarizabilities, and for systems ranging from organic molecules over 2D materials and water clusters to Watson-Crick DNA base-pairs and even ubiquitin. Conceptually, the AML approach extends Mendeleev's table to effectively account for chemical environments, which allows the systematic reconstruction of many chemistries from local building blocks.

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Cited by 3 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. FCHL revisited: faster and more accurate quantum machine learning

    physics.chem-ph 2019-09 accept novelty 6.0 of 10

    A discretized, hyperparameter-optimized revision of the FCHL18 descriptor yields state-of-the-art accuracy and order-of-magnitude speedups for kernel-based quantum machine learning of molecular energies and forces.

  2. IMPRESSION -- Prediction of NMR Parameters for 3-dimensional chemical structures using Machine Learning with near quantum chemical accuracy

    physics.chem-ph 2019-08 conditional novelty 6.0 of 10

    A kernel ridge regression model trained on DFT-computed NMR parameters predicts 1H and 13C shifts and 1JCH couplings with errors comparable to DFT, fast enough for routine 3D structure screening.

  3. Machine learning the computational cost of quantum chemistry

    physics.chem-ph 2019-08 conditional novelty 6.0 of 10

    Kernel-ridge models on molecular fingerprints predict quantum-chemistry job runtimes well enough to improve simulated HPC scheduling and reduce CPU overhead by 10 to 90 percent.

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