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Data-Driven Tight Frame for Cryo-EM Image Denoising and Conformational Classification

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arxiv 1810.08829 v2 pith:U5TRCTUD submitted 2018-10-20 stat.CO eess.IV

Data-Driven Tight Frame for Cryo-EM Image Denoising and Conformational Classification

classification stat.CO eess.IV
keywords cryo-emdenoisingimagealgorithmddtfclassificationconformationaldata-driven
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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The cryo-electron microscope (cryo-EM) is increasingly popular these years. It helps to uncover the biological structures and functions of macromolecules. In this paper, we address image denoising problem in cryo-EM. Denoising the cryo-EM images can help to distinguish different molecular conformations and improve three dimensional reconstruction resolution. We introduce the use of data-driven tight frame (DDTF) algorithm for cryo-EM image denoising. The DDTF algorithm is closely related to the dictionary learning. The advantage of DDTF algorithm is that it is computationally efficient, and can well identify the texture and shape of images without using large data samples. Experimental results on cryo-EM image denoising and conformational classification demonstrate the power of DDTF algorithm for cryo-EM image denoising and classification.

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