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Pith Number

pith:FQRCSPJJ

pith:2025:FQRCSPJJIZOMNCKWSMME5CFDJ6
not attested not anchored not stored refs pending

Automating MD simulations for Proteins using Large language Models: NAMD-Agent

Achuth Chandrasekhar, Amir Barati Farimani

arxiv:2507.07887 v1 · 2025-07-10 · cs.CL · cs.CE · q-bio.BM

Open paper page JSON Open Graph Bundle Merged state Verified badge What is a Pith Number?
Add to your LaTeX paper 
\usepackage{pith}
\pithnumber{FQRCSPJJIZOMNCKWSMME5CFDJ6}

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Record completeness

1 Bitcoin timestamp
2 Internet Archive
3 Author claim open · sign in to claim
4 Citations open
5 Replications open
✓ Portable graph bundle live · download bundle · merged state
The bundle contains the canonical record plus signed events. A mirror can host it anywhere and recompute the same current state with the deterministic merge algorithm.

Cited by

5 papers in Pith

MDForge: Agentic Molecular Dynamics Pipeline Design under Sparse Simulator Feedback
El Agente Quntur: A research collaborator agent for quantum chemistry
PolyJarvis: An LLM-Orchestrated Agent for Automated All-Atom Molecular Dynamics of Amorphous Homopolymers
From Knowledge to Action: Outcomes of the 2025 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistry
In-situ process monitoring for defect detection in wire-arc additive manufacturing: an agentic AI approach
Receipt and verification
First computed 2026-07-05T11:35:06.640867Z
Builder pith-number-builder-2026-05-17-v1
Signature Pith Ed25519 (pith-v1-2026-05) · public key
Schema pith-number/v1.0

Canonical hash

2c22293d29465cc6895693184e88a34f97384a260dedab10893a4d157fdbc523

Aliases

arxiv: 2507.07887 · arxiv_version: 2507.07887v1 · doi: 10.48550/arxiv.2507.07887 · pith_short_12: FQRCSPJJIZOM · pith_short_16: FQRCSPJJIZOMNCKW · pith_short_8: FQRCSPJJ
Agent API
Resolver JSON Graph JSON Events JSON Schema Signing key
Verify this Pith Number yourself 
curl -sH 'Accept: application/ld+json' https://pith.science/pith/FQRCSPJJIZOMNCKWSMME5CFDJ6 \
  | jq -c '.canonical_record' \
  | python3 -c "import sys,json,hashlib; b=json.dumps(json.loads(sys.stdin.read()), sort_keys=True, separators=(',',':'), ensure_ascii=False).encode(); print(hashlib.sha256(b).hexdigest())"
# expect: 2c22293d29465cc6895693184e88a34f97384a260dedab10893a4d157fdbc523
Canonical record JSON 
{
  "metadata": {
    "abstract_canon_sha256": "f4a53b149689d9b21bd3c9ee6af70fd67a3c2326ac6581736966574bfa35b2e2",
    "cross_cats_sorted": [
      "cs.CE",
      "q-bio.BM"
    ],
    "license": "http://creativecommons.org/licenses/by-sa/4.0/",
    "primary_cat": "cs.CL",
    "submitted_at": "2025-07-10T16:17:40Z",
    "title_canon_sha256": "4a52ba8443ec5597cb6777fa4aa9ea86438bd57570d6f79202e8490b4be002a2"
  },
  "schema_version": "1.0",
  "source": {
    "id": "2507.07887",
    "kind": "arxiv",
    "version": 1
  }
}