A locked logistic regression prior trained across eleven disease families improves Andes virus parent ranking (MRR 0.571 vs 0.274) and shows that retaining uncertain transmission edges alters source prioritization in real outbreaks.
Avoidable errors in the modelling of outbreaks of emerging pathogens, with special reference to ebola.Proceedings of the Royal Society B: Biological Sciences, 282(1806), 2015
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A Transferable Learned Temporal Prior for Transmission Reconstruction and Decision-Relevant Uncertainty in Real Outbreak Labels
A locked logistic regression prior trained across eleven disease families improves Andes virus parent ranking (MRR 0.571 vs 0.274) and shows that retaining uncertain transmission edges alters source prioritization in real outbreaks.