A new kinetic metric from spectral analysis of transition rates is applied to RNA energy landscapes, showing that ultrametricity depends on nucleotide order for fixed composition.
Parisi,Infinite number of order parameters for spin-glasses, Phys
4 Pith papers cite this work. Polarity classification is still indexing.
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Monte Carlo simulations up to L=18 yield evidence supporting replica symmetry breaking for low-energy excitations in 3D spin glasses and confirm the overlap-equivalence hypothesis.
Numerical examination of ultrametricity in Nussinov-model RNA energy minima shows wide variation across 18 RNAs and strong sensitivity to nucleotide sequence permutation.
TETRIS-ADAPT-VQE achieves fidelities above 99.3% for SYK (N=20) and 99.9998% for SK (L=18) but requires large resources for SYK models.
citing papers explorer
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Kinetic metric for basins of attraction of RNA secondary structures and analysis of the ultrametricity of the energy landscape
A new kinetic metric from spectral analysis of transition rates is applied to RNA energy landscapes, showing that ultrametricity depends on nucleotide order for fixed composition.
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On the true low-energy excitations of the three-dimensional spin glass
Monte Carlo simulations up to L=18 yield evidence supporting replica symmetry breaking for low-energy excitations in 3D spin glasses and confirm the overlap-equivalence hypothesis.
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Ultrametricity of Energy Minimum Configurations of RNA Secondary Structures in the Nussinov Model
Numerical examination of ultrametricity in Nussinov-model RNA energy minima shows wide variation across 18 RNAs and strong sensitivity to nucleotide sequence permutation.
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Ground state preparation of random all-to-all Hamiltonians using ADAPT-VQE
TETRIS-ADAPT-VQE achieves fidelities above 99.3% for SYK (N=20) and 99.9998% for SK (L=18) but requires large resources for SYK models.