pith. machine review for the scientific record. sign in

arxiv: 1704.07413 · v1 · submitted 2017-04-24 · ⚛️ physics.bio-ph · physics.chem-ph

Recognition: unknown

RT-TDDFT study of hole oscillations in B-DNA monomers and dimers

Authors on Pith no claims yet
classification ⚛️ physics.bio-ph physics.chem-ph
keywords baseholeoscillationsdimersmonomersapproxb-dnadimer
0
0 comments X
read the original abstract

We employ Real-Time Time-Dependent Density Functional Theory to study hole oscillations within a B-DNA monomer (one base pair) or dimer (two base pairs). Placing the hole initially at any of the bases which make up a base pair, results in THz oscillations, albeit of negligible amplitude. Placing the hole initially at any of the base pairs which make up a dimer is more interesting: For dimers made of identical monomers, we predict oscillations with frequencies in the range $f \approx$ 20-80 THz, with a maximum transfer percentage close to 1. For dimers made of different monomers, $f \approx$ 80-400 THz, but with very small or small maximum transfer percentage. We compare our results with those obtained recently via our Tight-Binding approaches and find that they are in good agreement.

This paper has not been read by Pith yet.

discussion (0)

Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.