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arxiv: 1806.10841 · v3 · submitted 2018-06-28 · ❄️ cond-mat.soft · physics.comp-ph

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ESPResSo++ 2.0: Advanced methods for multiscale molecular simulation

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classification ❄️ cond-mat.soft physics.comp-ph
keywords espressomolecularsimulationmultiscalepackagesscientificadaptiveadvanced
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Molecular simulation is a scientific tool dealing with challenges in material science and biology. This is reflected in a permanent development and enhancement of algorithms within scientific simulation packages. Here, we present computational tools for multiscale modeling developed and implemented within the ESPResSo++ package. These include the latest applications of the adaptive resolution scheme, the hydrodynamic interactions through a lattice Boltzmann solvent coupled to particle-based molecular dynamics, the implementation of the hierarchical strategy for equilibrating long-chained polymer melts and a heterogeneous spatial domain decomposition. The software design of ESPResSo++ has kept its highly modular C++ kernel with a Python user interface. Moreover, it was enhanced by automatic scripts parsing configurations from other established packages providing scientists with a rapid setup possibility for their simulations.

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