Importance of vdW and long-range exchange interactions to DFT-predicted docking energies between plumbagin and cyclodextrins
classification
❄️ cond-mat.mtrl-sci
physics.chem-ph
keywords
dockingenergiescyclodextrinsexchangelong-rangemethodsplumbaginsemi-empirical
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We calculated the docking energies between plumbagin and cyclodextrins, using density functional theory (DFT) with several functionals and some semi-empirical methods. Our DFT results revealed that GD3 dispersion force correction significantly improves the reliability of prediction. Also sufficient amount of long-range exchange is important to make it reliable further, agreeing with the previous work on argon dimer. In the semi-empirical methods, PM6 and PM7 qualitatively reproduce the stabilization by docking , yet under- and over-estimating the docking energies by ~10 kcal/mol, respectively.
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