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arxiv: cond-mat/0703383 · v2 · submitted 2007-03-14 · ❄️ cond-mat.soft · cond-mat.stat-mech· math.PR

Effective non-additive pair potential for lock-and-key interacting particles: the role of the limited valence

classification ❄️ cond-mat.soft cond-mat.stat-mechmath.PR
keywords effectivepotentialparticlescolloidaldevelopinginteractinglimitedlock-and-key
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Theoretical studies of self-assembly processes and condensed phases in colloidal systems are often based on effective inter-particle potentials. Here we show that developing an effective potential for particles interacting with a limited number of ``lock-and-key'' selective bonds (due to the specificity of bio-molecular interactions) requires -- beside the non-sphericity of the potential -- a (many body) constraint that prevent multiple bonding on the same site. We show the importance of retaining both valence and bond-selectivity by developing, as a case study, a simple effective potential describing the interaction between colloidal particles coated by four single-strand DNA chains.

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