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Unified Representation of Molecules and Crystals for Machine Learning

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arxiv 1704.06439 v4 pith:EIZ44N44 submitted 2017-04-21 physics.chem-ph cond-mat.mtrl-sci

classification physics.chem-phcond-mat.mtrl-sci
keywords learningmachinerepresentationsystemsatomisticcrystalskernelmolecular
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Accurate simulations of atomistic systems from first principles are limited by computational cost. In high-throughput settings, machine learning can reduce these costs significantly by accurately interpolating between reference calculations. For this, kernel learning approaches crucially require a representation that accommodates arbitrary atomistic systems. We introduce a many-body tensor representation that is invariant to translations, rotations, and nuclear permutations of same elements, unique, differentiable, can represent molecules and crystals, and is fast to compute. Empirical evidence for competitive energy and force prediction errors is presented for changes in molecular structure, crystal chemistry, and molecular dynamics using kernel regression and symmetric gradient-domain machine learning as models. Applicability is demonstrated for phase diagrams of Pt-group/transition-metal binary systems.

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Cited by 2 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. Quotient Complex Transformer (QCformer) for Perovskite Data Analysis

    cs.LG 2025-05 conditional novelty 6.0 of 10

    Crystal structures encoded as quotient complexes with triangle features give improved perovskite bandgap prediction when processed by a simplex-based transformer.

  2. Predicting outcomes of catalytic reactions using machine learning

    physics.chem-ph 2019-08 reject novelty 6.0 of 10

    The paper claims up to 93% accuracy in predicting catalytic reaction products on gold surfaces from 145 reactions, but the accuracy is computed on the training set after tuning parameters on that same set.

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