Pith. sign in

REVIEW 2 cited by

Computational Motility Tracking of Calcium Dynamics in Toxoplasma gondii

Not yet reviewed by Pith; the record is open.

This paper has not been read by Pith yet. Machine review is queued; the pith claim, tier, and objections will appear here once it completes.

SPECIMEN: schema-true, not a live event

T0 review · schema-true

One-sentence machine reading of the paper's core claim.

pith:XXXXXXXX · record.json · timestamp

arxiv 1708.01871 v2 pith:K4DE324N submitted 2017-08-01 q-bio.QM cs.CVq-bio.CB

classification q-bio.QMcs.CVq-bio.CB
keywords gondiimotilitycalciumcytosolicextracellularpatternssignalingvirulence
verification ladder T0 review T1 audit T2 compute T3 formal

Signed reviews

No signed human review yet.

0 comments
read the original abstract

Toxoplasma gondii is the causative agent responsible for toxoplasmosis and serves as one of the most common parasites in the world. For a successful lytic cycle, T. gondii must traverse biological barriers in order to invade host cells, and as such, motility is critical for its virulence. Calcium signaling, governed by fluctuations in cytosolic calcium (Ca2+) concentrations, is utilized universally across life and regulates many cellular processes, including the stimulation of T. gondii virulence factors such as motility. Therefore, increases in cytosolic calcium, called calcium oscillations, serve as a means to link and quantify the intracellular signaling processes that lead to T. gondii motility and invasion. Here, we describe our work extracting, quantifying and modeling motility patterns of T. gondii before and after the addition of pharmacological drugs and/or extracellular calcium. We demonstrate a computational pipeline including a robust tracking system using optical flow and dense trajectory features to extract T. gondii motility patterns. Using this pipeline, we were able to track changes in T.gondii motility in response to cytosolic Ca2+ fluxes in extracellular parasites. This allows us to study how Ca2+ signaling via release from intracellular Ca2+ stores and/or from extracellular Ca2+ entry relates to motility patterns, a crucial first step in developing countermeasures for T. gondii virulence.

Discussion (0). Continue with ORCID to comment.

Forward citations

Cited by 2 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. Lightweight and Scalable Particle Tracking and Motion Clustering of 3D Cell Trajectories

    cs.CV 2019-08 conditional novelty 4.0 of 10

    An unsupervised pipeline using AR-parameterized trajectories, Martin distance, and spectral clustering reports three T. gondii motion phenotypes in 3D videos, with a Dask-based distributed version up to 87.9% faster.

  2. Object Tracking in a $360^o$ View: A Novel Perspective on Bridging the Gap to Biomedical Advancements

    cs.CV 2024-12 unverdicted novelty 2.0 of 10

    A review of object tracking algorithms for biomedical video concludes that deep learning is the most capable family, but it includes a placeholder citation for a model described as real.

Pith tools