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Multiresolution Equivariant Graph Variational Autoencoder

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arxiv 2106.00967 v3 pith:KVTMGSVN submitted 2021-06-02 cs.LG cs.SIphysics.chem-ph

classification cs.LGcs.SIphysics.chem-ph
keywords equivariantgraphmgvaegenerationgenerativegraphsmolecularmultiresolution
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In this paper, we propose Multiresolution Equivariant Graph Variational Autoencoders (MGVAE), the first hierarchical generative model to learn and generate graphs in a multiresolution and equivariant manner. At each resolution level, MGVAE employs higher order message passing to encode the graph while learning to partition it into mutually exclusive clusters and coarsening into a lower resolution that eventually creates a hierarchy of latent distributions. MGVAE then constructs a hierarchical generative model to variationally decode into a hierarchy of coarsened graphs. Importantly, our proposed framework is end-to-end permutation equivariant with respect to node ordering. MGVAE achieves competitive results with several generative tasks including general graph generation, molecular generation, unsupervised molecular representation learning to predict molecular properties, link prediction on citation graphs, and graph-based image generation.

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  1. Graph Counterfactual Explainable AI via Latent Space Traversal

    cs.LG 2025-01 conditional novelty 5.0 of 10

    Counterfactual graph explanations are generated by gradient descent in the latent space of a permutation-equivariant graph VAE, steering the graph's encoding to the opposite class.

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