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The role of fluid friction in streamer formation and biofilm growth
Soft Condensed Matter · Submitted 11 Mar 2024
abstract compiled · 2026-09-23 · no language-model review
The authors' main claim We develop a simple model of friction-limited growth, which agrees with the experimental observations.
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The abstract, sentence by sentence
Bacillus subtilis biofilms were grown in laminar channel flow at wall shear stress spanning one order of magnitude ($\tau_w = 0.068$ Pa to $\tau_w = 0.67$ Pa). We monitor, non-invasively, the evolution of the three-dimensional distribution of biofilm over seven days using optical coherence tomography (OCT). The obtained biofilms consist of many microcolonies where the characteristic colony has a base structure in the form of a leaning pillar and a streamer in the form of a thin filament that originates near the tip of the pillar. While the shape, size and distribution of these microcolonies depend on the imposed shear stress, the same structural features appear consistently for all shear stress values. The formation of streamers seems to occur after the development of a base structure, suggesting that the latter induces a curved secondary flow that triggers the formation of the streamers. Moreover, we observe that the biofilm volume grows approximately linearly over seven days for all the shear stress values, with a growth rate that is inversely proportional to the wall shear stress. We develop a simple model of friction-limited growth, which agrees with the experimental observations. The model provides physical insight into growth mechanisms and can be used to develop accurate continuum models of bacterial biofilm growth.
background contribution method result interpretation main claim
| # | sentence | role | the authors' own work | states the main conclusion | strength |
|---|---|---|---|---|---|
| s0 | Bacillus subtilis biofilms were grown in laminar channel flow at wall shear stress spanning one order of magnitude ($\tau_w = 0.068$ Pa to $\tau_w = 0.67$ Pa). | method 0.97 | 0.93 | 0.02 | asserted 0.97 |
| s1 | We monitor, non-invasively, the evolution of the three-dimensional distribution of biofilm over seven days using optical coherence tomography (OCT). | method 0.99 | 0.97 | 0.02 | asserted 1.00 |
| s2 | The obtained biofilms consist of many microcolonies where the characteristic colony has a base structure in the form of a leaning pillar and a streamer in the form of a thin filament that originates near the tip of the pillar. | result 1.00 | 0.93 | 0.07 | asserted 1.00 |
| s3 | While the shape, size and distribution of these microcolonies depend on the imposed shear stress, the same structural features appear consistently for all shear stress values. | result 1.00 | 0.92 | 0.12 | asserted 1.00 |
| s4 | The formation of streamers seems to occur after the development of a base structure, suggesting that the latter induces a curved secondary flow that triggers the formation of the streamers. | interpretation 1.00 | 0.82 | 0.25 | hedged possibility 0.98 |
| s5 | Moreover, we observe that the biofilm volume grows approximately linearly over seven days for all the shear stress values, with a growth rate that is inversely proportional to the wall shear stress. | result 1.00 | 0.97 | 0.25 | asserted 0.99 |
| s6 | We develop a simple model of friction-limited growth, which agrees with the experimental observations. | contribution 0.49 | 0.96 | 0.19 | asserted 1.00 |
| s7 | The model provides physical insight into growth mechanisms and can be used to develop accurate continuum models of bacterial biofilm growth. | interpretation 0.61 | 0.74 | 0.22 | asserted 0.77 |
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The paper
Original abstract
Bacillus subtilis biofilms were grown in laminar channel flow at wall shear stress spanning one order of magnitude ($\tau_w = 0.068$ Pa to $\tau_w = 0.67$ Pa). We monitor, non-invasively, the evolution of the three-dimensional distribution of biofilm over seven days using optical coherence tomography (OCT). The obtained biofilms consist of many microcolonies where the characteristic colony has a base structure in the form of a leaning pillar and a streamer in the form of a thin filament that originates near the tip of the pillar. While the shape, size and distribution of these microcolonies depend on the imposed shear stress, the same structural features appear consistently for all shear stress values. The formation of streamers seems to occur after the development of a base structure, suggesting that the latter induces a curved secondary flow that triggers the formation of the streamers. Moreover, we observe that the biofilm volume grows approximately linearly over seven days for all the shear stress values, with a growth rate that is inversely proportional to the wall shear stress. We develop a simple model of friction-limited growth, which agrees with the experimental observations. The model provides physical insight into growth mechanisms and can be used to develop accurate continuum models of bacterial biofilm growth.
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