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Training-Free Guidance for Discrete Diffusion Models for Molecular Generation

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arxiv 2409.07359 v1 pith:2AAQONM6 submitted 2024-09-11 stat.ML cs.LGphysics.chem-phq-bio.BM

classification stat.MLcs.LGphysics.chem-phq-bio.BM
keywords guidancediffusiondiscretemodelsdatagenerationmoleculartraining-free
verification ladder T0 review T1 audit T2 compute T3 formal
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Training-free guidance methods for continuous data have seen an explosion of interest due to the fact that they enable foundation diffusion models to be paired with interchangable guidance models. Currently, equivalent guidance methods for discrete diffusion models are unknown. We present a framework for applying training-free guidance to discrete data and demonstrate its utility on molecular graph generation tasks using the discrete diffusion model architecture of DiGress. We pair this model with guidance functions that return the proportion of heavy atoms that are a specific atom type and the molecular weight of the heavy atoms and demonstrate our method's ability to guide the data generation.

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Cited by 1 Pith paper

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score.

  1. Discrete Diffusion Models: A Unified Framework from Tokenization to Generation

    cs.LG 2026-07 unverdicted novelty 4.0 of 10

    Discrete diffusion models are re-framed as instances of a tokenization-centric, four-component design space (corruption, denoiser, objective, sampler) in a broad survey with no new experimental or theoretical results.

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