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A Review on Scientific Knowledge Extraction using Large Language Models in Biomedical Sciences

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arxiv 2412.03531 v1 pith:XQBQW5PY submitted 2024-12-04 cs.CL cs.LG

classification cs.CLcs.LG
keywords llmssynthesisbiomedicalevidenceextractionmedicalapplicationschallenges
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The rapid advancement of large language models (LLMs) has opened new boundaries in the extraction and synthesis of medical knowledge, particularly within evidence synthesis. This paper reviews the state-of-the-art applications of LLMs in the biomedical domain, exploring their effectiveness in automating complex tasks such as evidence synthesis and data extraction from a biomedical corpus of documents. While LLMs demonstrate remarkable potential, significant challenges remain, including issues related to hallucinations, contextual understanding, and the ability to generalize across diverse medical tasks. We highlight critical gaps in the current research literature, particularly the need for unified benchmarks to standardize evaluations and ensure reliability in real-world applications. In addition, we propose directions for future research, emphasizing the integration of state-of-the-art techniques such as retrieval-augmented generation (RAG) to enhance LLM performance in evidence synthesis. By addressing these challenges and utilizing the strengths of LLMs, we aim to improve access to medical literature and facilitate meaningful discoveries in healthcare.

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  1. Context-Aware Scientific Knowledge Extraction on Linked Open Data using Large Language Models

    cs.IR 2025-06 reject novelty 4.0 of 10

    WISE combines LLM filtering, word-overlap scoring, and adaptive stopping in a recursive tree search to extract and synthesize knowledge from linked web sources, reporting higher recall and detail than general LLM base...

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