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REVIEW 5 major objections 6 minor 67 references

Prediction of Geoeffective CMEs Using SOHO Images and Deep Learning

T0 review · 5 major / 6 minor · reviewed 2026-08-10 · deepseek-v4-flash

Pith's one-line read A deep-learning ensemble trained on SOHO images predicts which Earth-arriving coronal mass ejections will trigger geomagnetic storms, with a Matthews correlation coefficient of 0.807 and a true skill statistic of 0.714 on a held-out test…

desk verdict Useful question and clean architecture, but a random temporal split and an unfinished draft make the headline metrics unreliable for future CMEs. read the letter →

arxiv 2501.01011 v1 pith:K5W5HMRD submitted 2025-01-02 cs.LG astro-ph.SRphysics.space-ph

classification cs.LGastro-ph.SRphysics.space-ph
keywords coronalmassejectionsgeomagneticstormsDstindexdeeplearningtransferensembleSOHOimageryspaceweatherforecasting
verification ladder T0 review T1 audit T2 compute T3 formal

The pith

A machine-rendered reading of the paper's core claim, the machinery that carries it, and where it could break.

The reading

The paper asks whether machine learning can tell, from solar images alone, whether a coronal mass ejection (CME) that reaches Earth will cause a geomagnetic storm, defined by a minimum Dst index below -50 nT. It proposes GeoCME, an ensemble of two pretrained deep convolutional networks, ResNet152 and InceptionResNetV2, retrained on LASCO C2, EIT 195 Å, and MDI magnetogram observations of 136 halo/partial halo CMEs from Solar Cycle 23. The central claim is that this image-based model predicts geoeffectiveness on a held-out test set of 28 events with MCC 0.807 and TSS 0.714 in deterministic mode, and with a Brier score of 0.094 and Brier skill score of 0.493 in probabilistic mode; five-fold cross-validation gives similar averages. If the paper is right, a purely image-driven pipeline, needing no calculated CME parameters, could serve as the second step of operational space-weather forecasting once CME arrival is known.

What carries the argument

The load-bearing mechanism is ensemble transfer learning over a multimodal image set. Each SOHO instrument is assigned two parallel ImageNet-pretrained convolutional networks, ResNet152 and InceptionResNetV2, that convert raw images into feature vectors; concatenation plus three 3×3 convolutional blocks with 64, 128, and 256 filters, batch normalization, and LeakyReLU activation, a 1024-neuron dense layer, and a single sigmoid neuron turn those features into an event-level probability. Two averaging ensembles, first over multiple images per instrument and then over the three instruments, combine 3,107 images into one prediction per CME event, while a weighted binary cross-entropy loss emphasizing the 35-event minority class is used for training. The ensemble identity is what lets a small labelled set of 136 events exploit ImageNet features rather than training a deep network from scratch.

What would settle it

Re-run the experiment with a strict temporal split, training on 1997-2003 and testing on 2004-2006; if the chronological MCC drops far below 0.807 or the model's false-negative rate rises, the random-split result was inflated by within-cycle pattern similarity rather than a stable image-to-storm relationship.

Watch

Extended reading notes

Core claim

The paper's central claim is that the visual content of SOHO images carries enough information to judge whether an Earth-arriving halo or partial halo CME will produce a geomagnetic storm. GeoCME is built as three instrument-specific pipelines that share a design: for a given event, LASCO C2 base-difference images, EIT 195 Å images, and MDI magnetograms are each passed through a ResNet152 and an InceptionResNetV2 pretrained on ImageNet; the two output vectors are concatenated, refined by three convolutional blocks and two dense layers, and averaged first over images of the same instrument and then over instruments. The final sigmoid output is the predicted probability of geoeffectiveness, converted to a deterministic label with threshold 0.6. On the 28-event held-out test set the paper reports 21 true positives, 5 true negatives, 2 false positives, and no false negatives, hence MCC 0.807 and TSS 0.714; in probabilistic mode it reports Brier 0.094 and Brier skill 0.493. It concludes that the model learns a usable mapping from solar images to CME geoeffectiveness, and that combining all three instruments is better than using any subset.

Load-bearing premise

The evaluation splits events randomly rather than by time, so it assumes that a CME's image appearance and its storm-causing potential do not change systematically over the 1997-2006 observing window; if they do, the reported scores may not hold for future events.

Editorial extensions

If this is right

  • An operational two-step forecast becomes possible: existing arrival-time models identify which CMEs will hit Earth, and GeoCME then labels those events as storm-producing or not from images alone.
  • Because the model never misses a storm on the held-out test set but issues two false alarms, its deterministic mode behaves as a sensitive storm alarm for this test distribution.
  • Removing both pretrained base models drops MCC from 0.807 to 0.365, so the paper's result depends on the feature representations transferred from ImageNet rather than on the small amount of solar data by itself.
  • Using all three instruments beats any single instrument or pair, and among single instruments EIT is the best, suggesting the different image modalities contribute complementary visual information.
  • The five-fold cross-validation averages are close to the 80:20 split results, indicating the reported performance is not an artifact of one particular split under the paper's random-split protocol.

Reading between the lines

Editorial extensions of the paper, not claims the author makes directly.

  • The paper's 80:20 split is random rather than chronological, so the reported skill should be read as within-cycle pattern recognition; a temporal split would be the natural test of whether GeoCME would perform operationally on future, unseen solar-cycle conditions.
  • The model labels events only against the $Dst < -50$ nT storm threshold; the same architecture could be retrained at $Dst < -100$ nT or on continuous Dst regression, and the class imbalance of 101 geoeffective versus 35 non-geoeffective events makes the choice of threshold particularly consequential.
  • Saliency or attribution maps over the LASCO, EIT, and MDI inputs could reveal which visual signatures drive the prediction, potentially connecting the deep features to physical CME properties such as width, brightness, source-region complexity, or magnetic field orientation.
  • A direct extension to Solar Cycle 24 or to SDO/AIA and HMI imagery would test whether the transferred features and the learned solar representations generalize to newer instruments and different cycle conditions.
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Editorial analysis

A structured set of objections, weighed in public.

Desk editor's note, referee report, and a circularity audit.

Referee Report

5 major / 6 minor

Summary. The paper proposes GeoCME, an ensemble deep-learning model that combines ResNet152 and InceptionResNetV2 features extracted from SOHO LASCO C2, EIT 195 Å, and MDI images to predict whether an Earth-arriving CME will cause a geomagnetic storm (Dst < -50 nT). The dataset contains 136 halo/partial halo CMEs from Solar Cycle 23 (101 geoeffective, 35 non-geoeffective). Using an 80:20 random split, the authors report test-set MCC 0.807 and TSS 0.714 for deterministic prediction and BS 0.094 / BSS 0.493 for probabilistic forecasting, along with ablation studies and a five-fold cross-validation. The manuscript is currently incomplete, with several sections marked '(To be completed)'. The evaluation rests on a small, randomly split test set with no confidence intervals or baseline comparisons, so the headline skill estimates are not yet firmly established.

Significance. If the reported performance survives a rigorous temporal and uncertainty-aware evaluation, GeoCME would be a valuable image-based tool for operational geoeffectiveness forecasting, and the use of multi-instrument SOHO imagery with transfer learning is a sensible direction given the small dataset. The paper's strengths include the use of publicly available data, a clearly stated two-step arrival-then-geoeffectiveness framing, ablation tests separating base models and instrument contributions, and both deterministic and probabilistic evaluation. However, the current evidence is conditional: the test set is small, the split is not temporal, no baselines are given, and the manuscript is unfinished. The central claim of genuine held-out predictive skill is plausible but not yet demonstrated.

major comments (5)
  1. [Sections 3.1, 3.2, 4.1, 4.2, 5] The manuscript is incomplete: Sections 3.1, 3.2, 4.1, 4.2, and 5 contain the literal placeholder '(To be completed)' in place of the transfer-learning details, the GeoCME model description, the evaluation-metrics discussion, the evaluation results, and the conclusions, and the text retains a fragment from another article template ('A&A proofs' in the figure block after Figure 3). These placeholders must be filled in before the technical content can be assessed.
  2. [Section 4.1 and Section 5] The evaluation uses random splits rather than temporal splits. The 80:20 scheme in Section 4.1 and the five-fold cross-validation in Section 5 both partition events without respect to time, although the events span 1997-2006. Because solar-cycle phase, CME properties, and SOHO instrument behavior change over this interval, random splitting allows training and test events from the same phase to be near-duplicates in covariates, which can inflate the reported MCC and TSS for future CMEs. A temporally blocked evaluation (e.g., train on earlier years, test on later years) is needed to support the forecasting claim.
  3. [Section 4.2, Figure 10] The test set has only 28 events, with 7 non-geoeffective cases, and the reported MCC of 0.807 and TSS of 0.714 are point estimates without confidence intervals. The TSS value is determined by exactly two false positives (FP=2 in Figure 10), so even a small amount of temporal leakage or threshold variation can materially change the headline metrics. Please report bootstrap or exact confidence intervals, per-class error rates, and the variance of the five-fold cross-validation results in Section 5.
  4. [Section 4.2 and Section 4.3] No baseline comparison is provided. The Brier skill score in Eq. (5) uses the climatological mean as a reference, but the deterministic MCC and TSS are not benchmarked against trivial predictors (e.g., always predicting the majority class) or against existing CME-parameter-based classifiers such as those cited in the Introduction. Without such baselines, the claim that GeoCME achieves 'good performance' is not fully substantiated.
  5. [Equation (1)] The class-weight notation in the WBCE loss is inconsistent: the text states that w0 is the weight for the negative class and w1 for the positive class, but the formula assigns w0 to the yi log(ŷi) term (positive) and w1 to the (1-yi) log(1-ŷi) term (negative). Please correct the formula or the description, and clarify which weighting was actually used in training, since this affects reproducibility of the imbalance handling.
minor comments (6)
  1. [Section 4.2] The sentence 'GeoCME-RN performs better than GeoCME-IRN, emphasizing the importance of InceptionResNet' is self-contradictory: if GeoCME-RN (which removes InceptionResNet) performs better, the result emphasizes ResNet rather than InceptionResNet. Please correct.
  2. [Section 4.1] The list of evaluation metrics in Section 4.1 includes Accuracy, F1-Score, Recall, Precision, Hamming Loss, and AUC, but the experiments report only MCC and TSS (and later BS/BSS). Please either report the listed metrics or remove them from the list.
  3. [Sections 4.1, 4.2, 5] The threshold of 0.6 and the hyperparameters were selected using the validation set (Figure 8, Table 3), but the manuscript does not state how many validation evaluations were used. Please clarify, and consider a nested cross-validation to avoid optimistic selection bias.
  4. [Section 4.2] For the seven instrument-ablation cases in Figures 11 and 13, it is unclear whether the hyperparameters and the decision threshold were re-tuned for each case. Please specify the training protocol for each ablation.
  5. [Figures 9, 11, 12, 13] The bar charts report single metric values without error bars or point labels. Adding numerical values and uncertainty estimates would make the comparisons among variants and instrument combinations more informative.
  6. [Data Availability] No code, trained model weights, or image-preprocessing pipeline are provided. Given the paper's reliance on a custom ensemble and transfer-learning setup, these artifacts would substantially improve reproducibility.

Circularity Check

0 steps flagged · score 1.0 of 10

No significant circularity: GeoCME is an empirical classifier whose held-out test evaluation does not reduce to its training inputs.

full rationale

GeoCME's central claim is an empirical predictive-skill claim: a supervised classifier is trained on SOHO images (LASCO C2, EIT, MDI) with geoeffectiveness labels derived from external Dst measurements in the RC list, and then evaluated on a randomly held-out 20% test set. There is no equation in the paper that defines the predicted probability in terms of the Dst label, nor any fitted parameter that is renamed as a prediction. The 0.6 decision threshold is selected using the validation set and the hyperparameters by grid search; this is standard model selection on data that is disjoint from the test set, so the reported MCC 0.807, TSS 0.714, BS 0.094, and BSS 0.493 remain held-out estimates rather than fits to the test outcome. The self-citations, e.g., to Alobaid et al. (2022, 2023) for base-difference imagery and CME arrival prediction, supply methodological context and external tools; they are not used to justify the geoeffectiveness-prediction result itself. The more serious concern with this paper is the random, non-temporal split in Section 4.1 and the five-fold CV in Section 5, which may overstate generalization because nearby solar-cycle/instrument states can appear in both training and test folds. That is a correctness/validation risk (covariate shift), not a circularity of derivation, because the train/test separation is still real. Accordingly, the circularity score is low.

Assumptions & free parameters 4 free parameters · 4 assumptions · 0 invented entities

The paper introduces no new physical entities. Its contribution is a fitted classifier; all key design choices (threshold, weights, hyperparameters) are parameters fit to the same small dataset. The main unexamined assumptions are the representativeness of the RC-list selection and the validity of random temporal splitting for a forecasting task.

free parameters (4)
  • classification threshold = 0.6
    Chosen to maximize MCC/TSS on the validation set (Section 4.1, Figure 8); applied to test set. With only about 11 validation events, the selected threshold is noisy.
  • WBCE class weights = not explicitly stated (inverse class-frequency ratio)
    Set from the 101:35 class imbalance in the dataset; formula in Section 3.2, Eq. (1).
  • network hyperparameters (batch size, epochs, dropout, layer sizes) = batch 32, epochs 100, dropout 0.3, dense 1024, conv filters 64/128/256
    Selected via scikit-learn grid search on the validation set (Section 3.2, Table 3).
  • image collection windows = C2: -10 min to +4 h; EIT: -4 h to 0; MDI: last 3 images
    Hand-selected following Fu et al. (2021) for C2; affects input statistics and is not justified by experiments.
assumptions (4)
  • domain assumption A geomagnetic storm is defined as minimum Dst < -50 nT.
    Adopted from Gonzalez et al. (1994) and Telloni (2022); standard threshold but a modelling choice.
  • domain assumption The 136 halo/partial halo CMEs from the RC list with Dst values are a representative sample of Earth-arriving CMEs.
    Relies on the completeness of the RC list and the halo/partial-halo selection; excludes non-halo CMEs and events without Dst values.
  • domain assumption ImageNet-pretrained features transfer to grayscale solar imagery.
    Transfer learning is the core mechanism (Section 3.1); no evidence provided that ImageNet features are informative for SOHO images beyond the reported accuracy.
  • domain assumption Random 80:20 splitting of events across 10 years yields an unbiased performance estimate.
    Assumes temporal independence of CME events; not justified for forecasting and may permit leakage of solar-cycle-level information.

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Pith. "Pith review of Prediction of Geoeffective CMEs Using SOHO Images and Deep Learning." pith.science (2026). https://pith.science/paper/K5W5HMRD

@misc{pith2026250101011,
  author       = {Pith},
  title        = {Pith review of: Prediction of Geoeffective CMEs Using SOHO Images and Deep Learning},
  year         = {2026},
  howpublished = {\url{https://pith.science/paper/K5W5HMRD}},
  note         = {Machine review of arXiv:2501.01011}
}
read the original abstract

The application of machine learning to the study of coronal mass ejections (CMEs) and their impacts on Earth has seen significant growth recently. Understanding and forecasting CME geoeffectiveness is crucial for protecting infrastructure in space and ensuring the resilience of technological systems on Earth. Here we present GeoCME, a deep-learning framework designed to predict, deterministically or probabilistically, whether a CME event that arrives at Earth will cause a geomagnetic storm. A geomagnetic storm is defined as a disturbance of the Earth's magnetosphere during which the minimum Dst index value is less than -50 nT. GeoCME is trained on observations from the instruments including LASCO C2, EIT and MDI on board the Solar and Heliospheric Observatory (SOHO), focusing on a dataset that includes 136 halo/partial halo CMEs in Solar Cycle 23. Using ensemble and transfer learning techniques, GeoCME is capable of extracting features hidden in the SOHO observations and making predictions based on the learned features. Our experimental results demonstrate the good performance of GeoCME, achieving a Matthew's correlation coefficient of 0.807 and a true skill statistics score of 0.714 when the tool is used as a deterministic prediction model. When the tool is used as a probabilistic forecasting model, it achieves a Brier score of 0.094 and a Brier skill score of 0.493. These results are promising, showing that the proposed GeoCME can help enhance our understanding of CME-triggered solar-terrestrial interactions.

Figures

Figures reproduced from arXiv: 2501.01011 by the authors.

Figure 1
Figure 1. Chart showing the total counts of halo/partial halo CMEs among all CMEs during Solar Cycle 23 (1996-2008) according to the SOHO/LASCO CME catalog. 400 300 200 100 0 Dst (nT) 0 5 10 15 20 CME Counts [PITH_FULL_IMAGE:figures/full_fig_p004_1.png] view at source ↗
Figure 2
Figure 2. Distribution of the Dst index values caused by the 136 halo/partial halo CME events in our dataset. 1 shows the total counts of halo/partial halo CMEs in Cycle 23 according to the SOHO/LASCO CME catalog (Yashiro et al., 2004). The CME events used in our study were obtained from the list of interplanetary coronal mass ejections (ICMEs), known as the RC list, compiled and maintained by Richardson and Cane (2010). We c… view at source ↗
Figure 3
Figure 3. Breakdown analysis of the geoeffective and non-geoeffective CME events in our dataset where a solid circle represents a geoeffective CME event and a cross mark represents a non-geoeffective CME event. These events were distributed over 10 years, from 1997 to 2006. A&A proofs: manuscript no. output (a) (b) (c) [PITH_FULL_IMAGE:figures/full_fig_p005_3.png] view at source ↗
Figures from the paper (10 more)
Figure 4
Figure 4. Figure 4: SOHO observations on the CME event that occurred at 08:06:00 UT on 17 Septem￾ber 2002. Shown from left to right are a LASCO C2 image, an EIT 195 ˚A image, and a full-disk MDI magnetogram. CME events in our dataset. These events were distributed over 10 years, from 1997…
Figure 5
Figure 5. Figure 5: Illustration of a residual block (left) and an InceptionResNet module (right). The residual block consists of two 3 × 3 convolutional layers followed by a residual connection that allows gradients to flow directly through the network, improving training efficiency. The…
Figure 6
Figure 6. Figure 6: Illustration of the GeoCME architecture. The ensemble model consists of three equal pipelines (left, middle, right), each dedicated to one of the three SOHO instruments (LASCO C2, EIT, and MDI), respectively. Each pipeline begins with two base models, namely ResNet152 …
Figure 7
Figure 7. Figure 7: Training and validation learning curves showing GeoCME is a well-fit model for geoeffective CME prediction. well pre-trained and GeoCME is a fusion of them, we see that the learning curves of GeoCME converge well in [PITH_FULL_IMAGE:figures/full_fig_p010_7.png]
Figure 8
Figure 8. Figure 8: GeoCME’s metric values for varying thresholds based on the validation set. The best metric values are obtained when the threshold is set to 0.6. 4.2. Performance Evaluation We conducted ablation tests to analyze and evaluate the components of our GeoCME framework. GeoC…
Figure 9
Figure 9. Figure 9: Results of the ablation tests for assessing four networks (GeoCME-RN-IRN, GeoCME-RN, GeoCME-IRN, and GeoCME) used as deterministic prediction models where GeoCME-RN-IRN represents GeoCME with RN and IRN models removed, GeoCME-RN represents GeoCME with RN models removed…
Figure 10
Figure 10. Figure 10: The confusion matrix obtained by GeoCME used as a deterministic prediction model on the test set. SOLA: main.tex; 3 January 2025; 2:07; p. 12 [PITH_FULL_IMAGE:figures/full_fig_p012_10.png]
Figure 11
Figure 11. Figure 11: Results of the ablation tests for assessing seven cases (C2, EIT, MDI, C2+EIT, C2+MDI, EIT+MDI, C2+EIT+MDI) using GeoCME as a deterministic prediction model where C2 represents the LASCO C2 images, EIT represents the EIT images, MDI represents the MDI magnetogram imag…
Figure 12
Figure 12. Figure 12: Results of the ablation tests for assessing four networks (GeoCME-RN-IRN, GeoCME-RN, GeoCME-IRN, and GeoCME) used as probabilistic forecasting models where GeoCME-RN-IRN represents GeoCME with RN and IRN models removed, GeoCME-RN represents GeoCME with RN models remov…
Figure 13
Figure 13. Figure 13: Results of the ablation tests for assessing seven cases (C2, EIT, MDI, C2+EIT, C2+MDI, EIT+MDI, C2+EIT+MDI) using GeoCME as a probabilistic forecasting model where C2 represents the LASCO C2 images, EIT represents the EIT images, MDI represents the MDI magnetogram ima…

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Pith tools

Reviewed August 10, 2026 · model on record in the stance chip above.