Paper Citation Record · LEDGER

Optimizing Sequence Alignment with Scored NFAs

As of 22 August 2026, this Paper Citation Record lists 20 of 20 outbound references and 3 inbound Pith citation observations for arXiv:2501.02162.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2501.02162 v1

Coverage vector

measured 20 of 20 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-10T22:17:14.130163Z

measured 23 of 23 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-22T06:32:14.747728+00:00

measured 3 of 3 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-15T19:49:36.386868Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: arxiv_reference, observed 2026-05-12T07:46:51.128351Z

Reference resolution

20 of 20 outbound references displayed

verified exact0
verified fuzzy17
unresolved3
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 99d0fe2d-ad66-476b-94fa-754559860da5 · outbound

This paper cites Bradshaw, Rasha Karakchi, and Jason D.

Optimizing Sequence Alignment with Scored NFAs Bradshaw, Rasha Karakchi, and Jason D

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.773969Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 5ee958a0-e530-4fb6-9c94-c84944202fb3 · outbound

This paper cites Bradshaw, and Jason D.

Optimizing Sequence Alignment with Scored NFAs Bradshaw, and Jason D

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.752648Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 9cbc4527-16c2-437c-b22f-d2d8a21efb31 · outbound

This paper cites an unresolved cited work.

Optimizing Sequence Alignment with Scored NFAs Unresolved cited work

Reference 3

Resolution: unresolved; no resolver link, observed 2026-08-10T22:17:14.004949Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 7cc75285-6d53-40fc-a64f-31c60a158eae · outbound

This paper cites Robotomata: A framework for approximate pattern matching of big data on an automata processor.

Optimizing Sequence Alignment with Scored NFAs Robotomata: A framework for approximate pattern matching of big data on an automata processor

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.711165Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation e74f1efc-9943-400d-9374-04cfe55a9acc · outbound

This paper cites Richards, and Jason D.

Optimizing Sequence Alignment with Scored NFAs Richards, and Jason D

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.687763Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 405914e1-4671-4b31-9da8-3ea80cd90c43 · outbound

This paper cites An overlay architecture for pattern matching.

Optimizing Sequence Alignment with Scored NFAs An overlay architecture for pattern matching

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.663348Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 829f97c4-14d9-49e1-b53b-71e0437d8509 · outbound

This paper cites Finding motifs in biological sequences using the micron automata processor.

Optimizing Sequence Alignment with Scored NFAs Finding motifs in biological sequences using the micron automata processor

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.634309Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation c5487b4a-a03a-4899-bb4d-3e4fa0e68045 · outbound

This paper cites an unresolved cited work.

Optimizing Sequence Alignment with Scored NFAs Unresolved cited work

Reference 8

Resolution: unresolved; raw_fallback, observed 2026-08-10T22:17:14.610399Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 79c14644-2554-448c-943e-b76c67d5336a · outbound

This paper cites Weighted automaton, 2024.

Optimizing Sequence Alignment with Scored NFAs Weighted automaton, 2024

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.591856Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation a190b40d-271f-49db-95c7-9d60ae6cbd7e · outbound

This paper cites Weighted automata algorithms.

Optimizing Sequence Alignment with Scored NFAs Weighted automata algorithms

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.554763Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation f354a35d-77ca-4c88-86eb-9122a1d56a30 · outbound

This paper cites Handbook of Weighted Automata.

Optimizing Sequence Alignment with Scored NFAs Handbook of Weighted Automata

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.528793Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 06d1aed4-1f75-45c8-a630-f10d3561eccb · outbound

This paper cites A Scored Non-Deterministic Finite Automata Processor for Sequence Alignment.

Optimizing Sequence Alignment with Scored NFAs A Scored Non-Deterministic Finite Automata Processor for Sequence Alignment

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-10T22:17:14.071809Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 792b909f-d670-4e9f-937b-86711086e142 · outbound

This paper cites Weighted automata algorithms.

Optimizing Sequence Alignment with Scored NFAs Weighted automata algorithms

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.507685Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 98694aba-3665-48b8-8489-a93a6b68b863 · outbound

This paper cites Bakos and Rasha Karakchi.

Optimizing Sequence Alignment with Scored NFAs Bakos and Rasha Karakchi

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.479437Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 3b0185ac-2f51-4484-985c-bb7543f1c50d · outbound

This paper cites An efficient and scalable semiconductor architecture for parallel automata processing.

Optimizing Sequence Alignment with Scored NFAs An efficient and scalable semiconductor architecture for parallel automata processing

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.451799Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 86adf251-a56e-482f-ad63-22917f7ec116 · outbound

This paper cites Approximating proba- bilistic models as weighted finite automata.

Optimizing Sequence Alignment with Scored NFAs Approximating proba- bilistic models as weighted finite automata

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.427276Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation da498924-034d-499e-b96a-eb98fc75347a · outbound

This paper cites Quasi-distances and weighted finite automata.

Optimizing Sequence Alignment with Scored NFAs Quasi-distances and weighted finite automata

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.408734Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation fa439222-5602-48cc-b047-7d0ee92a7d6c · outbound

This paper cites Zcu104 evaluation board user guide, 2019.

Optimizing Sequence Alignment with Scored NFAs Zcu104 evaluation board user guide, 2019

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.382191Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation ab381c51-4a9f-4aed-9ed8-db95036aafe4 · outbound

This paper cites Zcu102 evaluation board user guide, 2019.

Optimizing Sequence Alignment with Scored NFAs Zcu102 evaluation board user guide, 2019

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.357864Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Observation 40362383-84b1-4e96-b3cf-bcf8d7d18789 · outbound

This paper cites A scratchpad spiking neural network accelerator.

Optimizing Sequence Alignment with Scored NFAs A scratchpad spiking neural network accelerator

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T22:17:14.336001Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

Pith citing papers

Observation e93e628a-6ef7-4d3f-b987-620844a8783e · inbound

Toward a Lightweight, Scalable, and Parallel Secure Encryption Engine cites this paper.

Toward a Lightweight, Scalable, and Parallel Secure Encryption Engine Optimizing Sequence Alignment with Scored NFAs

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-15T19:49:36.386868Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c225335d-90a6-4cf0-93c3-f6a419cacbbb · inbound

ML-Based Automata Simplification for Symbolic Accelerators cites this paper.

ML-Based Automata Simplification for Symbolic Accelerators Optimizing Sequence Alignment with Scored NFAs

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-06T18:15:48.149334Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation a7d431a8-4008-4bba-95d9-211c32f2b864 · inbound

Machine Learning-Based Graph Simplification for Symbolic Accelerators cites this paper.

Machine Learning-Based Graph Simplification for Symbolic Accelerators Optimizing Sequence Alignment with Scored NFAs

Reference 7

Resolution: verified exact; arxiv_id, observed 2026-05-12T07:46:51.249200Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.