Paper Citation Record · LEDGER

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

As of 14 August 2026, this Paper Citation Record lists 71 of 71 outbound references and 8 inbound Pith citation observations for arXiv:2502.09571.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2502.09571 v2

Coverage vector

measured 71 of 71 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T21:04:57.862863Z

measured 79 of 79 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-14T06:32:32.682623+00:00

measured 8 of 8 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-07T15:08:18.722772Z

measured 1 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: arxiv_reference, observed 2026-08-05T02:28:24.338817Z

Reference resolution

71 of 71 outbound references displayed

verified exact3
verified fuzzy38
unresolved30
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

8
arxiv_reference, observed 2026-08-05T02:28:24.338817Z

Outbound references

Observation 716ae371-e6ac-44fb-a954-2f5166a8fa0e · outbound

This paper cites Equivariant Shape-Conditioned Generation of 3D Molecules for Ligand-Based Drug Design.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Equivariant Shape-Conditioned Generation of 3D Molecules for Ligand-Based Drug Design

Reference 1

Resolution: verified exact; local_arxiv, observed 2026-08-07T21:04:58.363774Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation ce37a957-3486-4fd6-952f-7e061082fdd8 · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 2

Resolution: unresolved; raw_fallback, observed 2026-08-07T21:04:59.397190Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation d1e338f0-e827-42e6-9c8e-7001e0bfc91c · outbound

This paper cites Competitive fragmentation modeling of esi-ms/ms spectra for putative metabolite identification.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Competitive fragmentation modeling of esi-ms/ms spectra for putative metabolite identification

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.378132Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 89991e6f-503b-4c1c-a468-d86814f27513 · outbound

This paper cites Structured Denoising Diffusion Models in Discrete State-Spaces.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Structured Denoising Diffusion Models in Discrete State-Spaces

Reference 4

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.500685Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation a9718367-7af8-4759-ba72-c5282f74af26 · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 5

Resolution: unresolved; raw_fallback, observed 2026-08-07T21:04:59.361295Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation fc040816-944e-403f-b832-85db37580e87 · outbound

This paper cites o cker, S. and D \.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra o cker, S. and D \

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.343293Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation bf308afb-c6d2-45aa-8efd-44a36b519a6f · outbound

This paper cites MassSpecGym: A benchmark for the discovery and identification of molecules.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra MassSpecGym: A benchmark for the discovery and identification of molecules

Reference 7

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.519386Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 941eabe8-f977-43c5-8d74-17c10a8faedc · outbound

This paper cites Ms2mol: A transformer model for illuminating dark chemical space from mass spectra.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Ms2mol: A transformer model for illuminating dark chemical space from mass spectra

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.325449Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation beb3425c-1bee-4f2f-8a0c-875e047f2371 · outbound

This paper cites Distributed Structure-Searchable Toxicity (DSSTox) Database.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Distributed Structure-Searchable Toxicity (DSSTox) Database

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.531765Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ccbf2e12-8250-4efc-b490-825b23b94754 · outbound

This paper cites Efficient and Degree-Guided Graph Generation via Discrete Diffusion Modeling.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Efficient and Degree-Guided Graph Generation via Discrete Diffusion Modeling

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.537607Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e8898451-6975-4624-86cf-1a28bad65e60 · outbound

This paper cites Diffdock: Diffusion steps, twists, and turns for molecular docking.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Diffdock: Diffusion steps, twists, and turns for molecular docking

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.307266Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation ef9bc7b8-fa2b-4963-801f-12ed41e7b3db · outbound

This paper cites and Nichol, A.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra and Nichol, A

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.549374Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation f15f70d9-21b5-45b2-a04b-cc76d87b6892 · outbound

This paper cites u hrkop, K., Shen, H., Meusel, M., Rousu, J., and B \.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra u hrkop, K., Shen, H., Meusel, M., Rousu, J., and B \

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.276287Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 5ef8b505-9701-46c3-9efa-0efe7478e2a7 · outbound

This paper cites u hrkop, K., Nothias, L.-F., Fleischauer, M., Reher, R., Ludwig, M., Hoffmann, M. A., Petras, D., Gerwick, W. H., Rousu, J., Dorrestein, P. C., and B \.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra u hrkop, K., Nothias, L.-F., Fleischauer, M., Reher, R., Ludwig, M., Hoffmann, M. A., Petras, D., Gerwick, W. H., Rousu, J., Dorrestein, P. C., and B \

Reference 14

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.560491Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 36921639-a640-4640-ad61-983f0c32a083 · outbound

This paper cites A., Petras, D., Gerwick, W.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra A., Petras, D., Gerwick, W

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.258547Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation b9341872-5567-42a4-b803-bf8c644f9337 · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 16

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.571809Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e00296a3-5f2a-456b-9fc5-04d81aefba42 · outbound

This paper cites Scalable Fragment-Based 3D Molecular Design with Reinforcement Learning.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Scalable Fragment-Based 3D Molecular Design with Reinforcement Learning

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.577137Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6491068a-c215-41e0-a2c3-fd68b5ed87f1 · outbound

This paper cites C., Collins, S.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra C., Collins, S

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.223463Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 36bc7180-bc27-42b8-a9db-6d113ea4a3a2 · outbound

This paper cites Prefix-tree decoding for predicting mass spectra from molecules.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Prefix-tree decoding for predicting mass spectra from molecules

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.205647Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 543580e3-2129-4d7f-9195-b501a627f835 · outbound

This paper cites J., and Coley, C.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra J., and Coley, C

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:59.186372Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 5a6ce58a-f832-44b4-831b-ae95e957160b · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 21

Resolution: unresolved; raw_fallback, observed 2026-08-07T21:04:59.166999Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 3cfa2213-dc03-406d-84b7-44a6d7729d00 · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 22

Resolution: unresolved; raw_fallback, observed 2026-08-07T21:04:59.026422Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 3d85439e-14ec-4346-a7ba-c9dd42260c0f · outbound

This paper cites N., Duvenaud, D., Hern \'a ndez-Lobato, J.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra N., Duvenaud, D., Hern \'a ndez-Lobato, J

Reference 23

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.610343Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 22c343d9-c61e-449c-91bd-ad7d7b2d2e10 · outbound

This paper cites Classifier-Free Diffusion Guidance.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Classifier-Free Diffusion Guidance

Reference 24

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.615419Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3f6ab98a-522f-4a71-bd0a-f369ca25842b · outbound

This paper cites Denoising diffusion probabilistic models.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Denoising diffusion probabilistic models

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.997133Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation a9324a4d-09d4-43cb-97f0-544e61120b6a · outbound

This paper cites I., Torres-Hernandez, A.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra I., Torres-Hernandez, A

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.978635Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 87f1abd5-e305-4102-9273-e0e1583ecda7 · outbound

This paper cites Elucidating the design space of diffusion-based generative models.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Elucidating the design space of diffusion-based generative models

Reference 27

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.631479Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 5611cfee-a90a-4f2d-8026-329b247b2eb7 · outbound

This paper cites W., and B \"o cker, S.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra W., and B \"o cker, S

Reference 28

Resolution: verified exact; doi, observed 2026-08-07T21:04:57.928329Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation f3412369-f39b-4b4a-93d6-aa86e63a4f97 · outbound

This paper cites Neuraldecipher--reverse-engineering extended-connectivity fingerprints (ecfps) to their molecular structures.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Neuraldecipher--reverse-engineering extended-connectivity fingerprints (ecfps) to their molecular structures

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.951298Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation cf7bbd5b-70e2-422f-ba90-e46f44ab5ba6 · outbound

This paper cites S., and Hashimoto, T.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra S., and Hashimoto, T

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.934926Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 6c1e5fa4-8d0d-4179-8664-ba4c363e02d8 · outbound

This paper cites Learning Deep Generative Models of Graphs.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Learning Deep Generative Models of Graphs

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.652380Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation fa8b652e-5bc7-4b6c-9c1f-38307a3b36e7 · outbound

This paper cites K., Buchanan, B., Feigenbaum, E., and Lederberg, J.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra K., Buchanan, B., Feigenbaum, E., and Lederberg, J

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.917500Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation f9c30f10-dce1-437e-adfc-9706d6e91b50 · outbound

This paper cites E., Chenthamarakshan, V., Das, P., and Kavraki, L.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra E., Chenthamarakshan, V., Das, P., and Kavraki, L

Reference 33

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.900964Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 5befcd68-5e01-4429-8515-05538fa9d053 · outbound

This paper cites On the variance of the adaptive learning rate and beyond.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra On the variance of the adaptive learning rate and beyond

Reference 34

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.883762Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 13dc5fde-b7c5-4a5a-ba8d-1221be477e40 · outbound

This paper cites Generating 3d molecules for target protein binding.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Generating 3d molecules for target protein binding

Reference 35

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.866780Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation e52c9667-4ec5-4efa-ac6b-da4611047a2b · outbound

This paper cites Constrained graph variational autoencoders for molecule design.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Constrained graph variational autoencoders for molecule design

Reference 36

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.849410Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 4e8df8b2-f373-41bd-8e33-3df1219de44d · outbound

This paper cites and Hutter, F.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra and Hutter, F

Reference 37

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.681372Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation f0b97101-5472-48ab-8f91-5bb170d24f66 · outbound

This paper cites and Hutter, F.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra and Hutter, F

Reference 38

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.814195Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 58ea52dd-2943-4e78-bac0-599c4065a5a1 · outbound

This paper cites Discrete Diffusion Modeling by Estimating the Ratios of the Data Distribution.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Discrete Diffusion Modeling by Estimating the Ratios of the Data Distribution

Reference 39

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.692224Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 00e7d622-fa21-4442-864c-4e759da274bb · outbound

This paper cites A 3d generative model for structure-based drug design.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra A 3d generative model for structure-based drug design

Reference 40

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.797038Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 441cf005-dc75-4678-9369-f84e6bea7368 · outbound

This paper cites and Ji, S.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra and Ji, S

Reference 41

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.777924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation c2a3f6a9-65b4-4a87-b2a5-8b7010167769 · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 42

Resolution: unresolved; raw_fallback, observed 2026-08-07T21:04:58.759807Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation c143ffe2-32e2-43bf-935f-0698eaed4c0e · outbound

This paper cites Efficiently predicting high resolution mass spectra with graph neural networks.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Efficiently predicting high resolution mass spectra with graph neural networks

Reference 43

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.742462Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 72ef0406-5585-4a12-969c-d8432387eccd · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 44

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.718877Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 19ebd99e-53da-4878-8ff7-bd4b749769a0 · outbound

This paper cites NIST standard reference database.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra NIST standard reference database

Reference 45

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.712503Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 6e25dfea-4288-4330-bffd-f2eddde5a43a · outbound

This paper cites Fiora: Local neighborhood-based prediction of compound mass spectra from single fragmentation events.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Fiora: Local neighborhood-based prediction of compound mass spectra from single fragmentation events

Reference 46

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.694506Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 9d9a1c55-29c7-4d5f-85e9-0f99c2a3830b · outbound

This paper cites Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models

Reference 47

Resolution: verified exact; local_arxiv, observed 2026-08-07T21:04:58.017880Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 9ba70f4e-ecd9-4a96-a362-e0ef2f374e65 · outbound

This paper cites A., Melnik, A.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra A., Melnik, A

Reference 48

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.675528Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation f8a00def-867b-4d43-86fb-81f76b27e9a3 · outbound

This paper cites P., Maragakis, P., Skopp, P., and Shaw, D.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra P., Maragakis, P., Skopp, P., and Shaw, D

Reference 49

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.656991Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 246a4648-b70a-42a9-99b6-5bf98049df81 · outbound

This paper cites L., Ghasemipour, K., Gontijo Lopes, R., Karagol Ayan, B., Salimans, T., et al.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra L., Ghasemipour, K., Gontijo Lopes, R., Karagol Ayan, B., Salimans, T., et al

Reference 50

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.749848Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 371676e2-aaf6-4bf2-ab4f-402a6c2f7de0 · outbound

This paper cites H., Kogej, T., Tyrchan, C., and Waller, M.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra H., Kogej, T., Tyrchan, C., and Waller, M

Reference 51

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.627117Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation cc12d7aa-1d6b-4e0e-8c25-11aca9a629ca · outbound

This paper cites D., Swainston, N., Samanta, S., Roberts, I., Wright Muelas, M., and Kell, D.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra D., Swainston, N., Samanta, S., Roberts, I., Wright Muelas, M., and Kell, D

Reference 52

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.610538Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 45c70a09-f93c-4585-a32d-1d7f7d35fdaf · outbound

This paper cites and Komodakis, N.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra and Komodakis, N

Reference 53

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.765873Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation fab85d69-9fc0-4f93-9407-f7002dbecf76 · outbound

This paper cites Deep unsupervised learning using nonequilibrium thermodynamics.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Deep unsupervised learning using nonequilibrium thermodynamics

Reference 54

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.578734Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation bcab7808-e017-4743-8cef-960a5c871c89 · outbound

This paper cites P., Kumar, A., Ermon, S., and Poole, B.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra P., Kumar, A., Ermon, S., and Poole, B

Reference 55

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.777194Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 1c923f9b-d273-46cf-b8db-b11fec867aff · outbound

This paper cites A., and Steinbeck, C.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra A., and Steinbeck, C

Reference 56

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.782174Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ed899777-998f-4800-88ef-7573fbce1a37 · outbound

This paper cites u hrkop, K., B \.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra u hrkop, K., B \

Reference 57

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.549124Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 3289bfbe-82f4-43b4-95af-85945197f75a · outbound

This paper cites T., Gonzalez, M., Wetzel, J., Wu, C., Hu, X., Prat, J., Mudrock, E., Hettinger, R., et al.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra T., Gonzalez, M., Wetzel, J., Wu, C., Hu, X., Prat, J., Mudrock, E., Hettinger, R., et al

Reference 58

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.529176Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation c06fc229-f623-4530-a1e8-9eb2ba8974f3 · outbound

This paper cites N., Kaiser, ., and Polosukhin, I.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra N., Kaiser, ., and Polosukhin, I

Reference 59

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.510913Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 232cdaf1-bfb7-4db3-bb1b-2556532f4bff · outbound

This paper cites Digress: Discrete denoising diffusion for graph generation.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Digress: Discrete denoising diffusion for graph generation

Reference 60

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.493664Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation c29a4601-3f9a-4e2b-9328-10d41a03c019 · outbound

This paper cites MADGEN : Mass-spec attends to de novo molecular generation.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra MADGEN : Mass-spec attends to de novo molecular generation

Reference 61

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.476350Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 1c0f0254-d8d2-4e35-a462-ba9e437f0194 · outbound

This paper cites L., Juergens, D., Bennett, N.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra L., Juergens, D., Bennett, N

Reference 62

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.458039Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation a20e4cd6-7421-4ab4-a5bd-4e5ddb56de34 · outbound

This paper cites Learning continuous and data-driven molecular descriptors by translating equivalent chemical representations.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Learning continuous and data-driven molecular descriptors by translating equivalent chemical representations

Reference 63

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.820152Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 7ace63fa-81ad-4fcb-8dd0-5d5032667b8c · outbound

This paper cites an unresolved cited work.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Unresolved cited work

Reference 64

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.825854Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4908a86d-98e4-419e-b3ac-43ac04691823 · outbound

This paper cites BUDDY : molecular formula discovery via bottom-up MS/MS interrogation.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra BUDDY : molecular formula discovery via bottom-up MS/MS interrogation

Reference 65

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.429541Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 35d9991c-a612-4aa7-a0e1-2fbd4d19ab05 · outbound

This paper cites Tandem mass spectrum prediction for small molecules using graph transformers.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Tandem mass spectrum prediction for small molecules using graph transformers

Reference 66

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.411908Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 475ebc51-413d-44cf-9095-70ed7fb985e1 · outbound

This paper cites FraGNNet: A Deep Probabilistic Model for Tandem Mass Spectrum Prediction.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra FraGNNet: A Deep Probabilistic Model for Tandem Mass Spectrum Prediction

Reference 67

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.841324Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e533d9e0-14c6-4fc6-8181-08588d0e9f4f · outbound

This paper cites MatterGen: a generative model for inorganic materials design.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra MatterGen: a generative model for inorganic materials design

Reference 68

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.846895Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3d139f67-e007-46d9-9cc2-833e10c9672f · outbound

This paper cites Artificial Intelligence for Science in Quantum, Atomistic, and Continuum Systems.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra Artificial Intelligence for Science in Quantum, Atomistic, and Continuum Systems

Reference 69

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.852403Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 7f74befa-edd9-4d9b-9f61-4930e6c734a3 · outbound

This paper cites How to train your neural network for molecular structure generation from mass spectra? In 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp.\ 817--822.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra How to train your neural network for molecular structure generation from mass spectra? In 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp.\ 817--822

Reference 70

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T21:04:58.393838Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 34c9bd2d-b803-4075-88e0-74012a84627e · outbound

This paper cites write newline.

DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra write newline

Reference 71

Resolution: unresolved; no resolver link, observed 2026-08-07T21:04:57.862863Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Pith citing papers

Observation 6c83234d-f092-440b-a791-2b30fd022444 · inbound

A collaborative constrained graph diffusion model for the generation of realistic synthetic molecules cites this paper.

A collaborative constrained graph diffusion model for the generation of realistic synthetic molecules DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 45

Resolution: unresolved; no resolver link, observed 2026-08-07T15:08:18.722772Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation fc22501d-26c1-482b-8094-1c5fe5ccb996 · inbound

SpectraLLM: Uncovering the Ability of LLMs for Molecular Structure Elucidation from Multi-Spectral Data cites this paper.

SpectraLLM: Uncovering the Ability of LLMs for Molecular Structure Elucidation from Multi-Spectral Data DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 87

Resolution: verified exact; arxiv_id, observed 2026-05-19T01:11:57.026337Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation f87e5452-1257-4f91-a07a-f8999dc9f5d4 · inbound

FRIGID: Scaling Diffusion-Based Molecular Generation from Mass Spectra at Training and Inference Time cites this paper.

FRIGID: Scaling Diffusion-Based Molecular Generation from Mass Spectra at Training and Inference Time DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 2

Resolution: metadata mismatch; arxiv_id, observed 2026-05-10T08:37:53.913381Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation efdf7e61-98db-4b7c-8ddd-f4284e0616d8 · inbound

FRIGID: Scaling Diffusion-Based Molecular Generation from Mass Spectra at Training and Inference Time cites this paper.

FRIGID: Scaling Diffusion-Based Molecular Generation from Mass Spectra at Training and Inference Time DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 2025

Resolution: unresolved; no resolver link, observed 2026-08-02T16:10:41.607350Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 2112306a-00eb-4503-be31-e304bfd4bfc1 · inbound

CoRe-Gen: Robust Spectrum-to-Structure Generation under Imperfect Fingerprint Conditions cites this paper.

CoRe-Gen: Robust Spectrum-to-Structure Generation under Imperfect Fingerprint Conditions DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 5

Resolution: verified exact; arxiv_id, observed 2026-05-14T20:19:28.114511Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation b68c3aab-41b8-4303-9d6b-14c2ab2162fe · inbound

Uncertainty-Calibrated Diffusion for Reliable 3D Molecular Graph Generation cites this paper.

Uncertainty-Calibrated Diffusion for Reliable 3D Molecular Graph Generation DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 5

Resolution: verified exact; arxiv_id, observed 2026-07-01T21:56:16.219086Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 694e61eb-cf56-4ff4-a574-36fcb4021880 · inbound

Streamlining Analysis and Design of Two-Dimensional Electronic Spectroscopy using Machine Learning cites this paper.

Streamlining Analysis and Design of Two-Dimensional Electronic Spectroscopy using Machine Learning DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 196

Resolution: verified exact; arxiv_id, observed 2026-06-26T19:29:48.300910Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Observation 06960283-aaf6-47f6-ab38-da5da13404af · inbound

MS-GPT: Rethinking MS/MS De Novo Structure Elucidation as Spectrum-Induced Posterior Querying of a Molecule-Language Model cites this paper.

MS-GPT: Rethinking MS/MS De Novo Structure Elucidation as Spectrum-Induced Posterior Querying of a Molecule-Language Model DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra

Reference 3

Resolution: unresolved; no resolver link, observed 2026-07-30T17:47:26.785672Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.