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MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation

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arxiv 2303.14444 v2 pith:2JW6IJNE submitted 2023-03-25 eess.IV cs.CV

MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation

classification eess.IV cs.CV
keywords segmentationmodelcompareddatasetsmedicalmultitalentpre-trainingannotated
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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The medical imaging community generates a wealth of datasets, many of which are openly accessible and annotated for specific diseases and tasks such as multi-organ or lesion segmentation. Current practices continue to limit model training and supervised pre-training to one or a few similar datasets, neglecting the synergistic potential of other available annotated data. We propose MultiTalent, a method that leverages multiple CT datasets with diverse and conflicting class definitions to train a single model for a comprehensive structure segmentation. Our results demonstrate improved segmentation performance compared to previous related approaches, systematically, also compared to single dataset training using state-of-the-art methods, especially for lesion segmentation and other challenging structures. We show that MultiTalent also represents a powerful foundation model that offers a superior pre-training for various segmentation tasks compared to commonly used supervised or unsupervised pre-training baselines. Our findings offer a new direction for the medical imaging community to effectively utilize the wealth of available data for improved segmentation performance. The code and model weights will be published here: [tba]

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Cited by 2 Pith papers

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    Primus and PrimusV2 are Transformer-centric models that match or exceed nnU-Net and top CNNs on nine 3D medical segmentation datasets by enforcing attention usage.

  2. In search of truth: Evaluating concordance of AI-based anatomy segmentation models

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    A harmonization framework enables comparison of six AI segmentation models on 31 structures in NLST CT scans, revealing strong agreement for lungs but invalid outputs for some vertebrae and ribs.