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arxiv: 1704.08056 · v3 · pith:CFQZXFYInew · submitted 2017-04-26 · ❄️ cond-mat.stat-mech · cond-mat.soft

Nonequilibrium interactions between ideal polymers and a repulsive surface

classification ❄️ cond-mat.stat-mech cond-mat.soft
keywords polymerdeltaworkdistributiondraggedexistenceforcefree
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We use Newtonian and overdamped Langevin dynamics to study long flexible polymers dragged by an external force at a constant velocity $v$. The work $W$ by that force depends on the initial state of the polymer and the details of the process. Jarzynski equality can be used to relate the non-equilibrium work distribution $P(W)$ obtained from repeated experiments to equilibrium free energy difference $\Delta F$ between the initial and final states. We use the power law dependence of the geometrical and dynamical characteristics of the polymer on the number of monomers $N$ to suggest the existence of a critical velocity $v_c(N)$, such that for $v<v_c$ the reconstruction of $\Delta F$ is an easy task, while for $v$ significantly exceeding $v_c$ it becomes practically impossible. We demonstrate the existence of such $v_c$ analytically for ideal polymer in free space and numerically for a polymer being dragged away from a repulsive wall. Our results suggest that the distribution of the dissipated work $W_{\rm d}=W-\Delta F$ in properly scaled variables approaches a limiting shape for large $N$.

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