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Unravelling Heterogeneous Transport of Endosomes

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arxiv 2107.07760 v1 pith:G53U3TBH submitted 2021-07-16 q-bio.SC cond-mat.soft

classification q-bio.SCcond-mat.soft
keywords heterogeneousdistributionsendosomeslocalprobabilitytransportanalysisanomalous
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A major open problem in biophysics is to understand the highly heterogeneous transport of many structures inside living cells, such as endosomes. We find that mathematically it is described by spatio-temporal heterogeneous fractional Brownian motion (hFBM) which is defined as FBM with a randomly switching anomalous exponent and random generalized diffusion coefficient. Using a comprehensive local analysis of a large ensemble of experimental endosome trajectories (> 10^5), we show that their motion is characterized by power-law probability distributions of displacements and displacement increments, exponential probability distributions of local anomalous exponents and power-law probability distributions of local generalized diffusion coefficients of endosomes which are crucial ingredients of spatio-temporal hFBM. The increased sensitivity of deep learning neural networks for FBM characterisation corroborates the development of this multi-fractal analysis. Our findings are an important step in understanding endosome transport. We also provide a powerful tool for studying other heterogeneous cellular processes.

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Cited by 2 Pith papers

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  1. Turning angle analysis reveals hidden anisotropies in the anomalous diffusion of molecules in live cells

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    cond-mat.stat-mech 2024-12 conditional novelty 6.0 of 10

    For Riemann-Liouville fractional Brownian motion, the solution of the FLEFE, the time-averaged MSD converges to the mean-squared increment rather than the MSD for 1/2<α<3/2, yielding spurious nonergodicity, while stro...

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