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Molecular Generative Adversarial Network with Multi-Property Optimization

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arxiv 2404.00081 v2 pith:JESRB5SD submitted 2024-03-29 q-bio.BM cs.AIcs.LG

classification q-bio.BMcs.AIcs.LG
keywords gansgenerativemctsmodelsmolecularmulti-propertyoptimizationadversarial
verification ladder T0 review T1 audit T2 compute T3 formal
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abstract

Deep generative models, such as generative adversarial networks (GANs), have been employed for $de~novo$ molecular generation in drug discovery. Most prior studies have utilized reinforcement learning (RL) algorithms, particularly Monte Carlo tree search (MCTS), to handle the discrete nature of molecular representations in GANs. However, due to the inherent instability in training GANs and RL models, along with the high computational cost associated with MCTS sampling, MCTS RL-based GANs struggle to scale to large chemical databases. To tackle these challenges, this study introduces a novel GAN based on actor-critic RL with instant and global rewards, called InstGAN, to generate molecules at the token-level with multi-property optimization. Furthermore, maximized information entropy is leveraged to alleviate the mode collapse. The experimental results demonstrate that InstGAN outperforms other baselines, achieves comparable performance to state-of-the-art models, and efficiently generates molecules with multi-property optimization. The source code will be released upon acceptance of the paper.

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Cited by 1 Pith paper

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. QCA-MolGAN: Quantum Circuit Associative Molecular GAN with Multi-Agent Reinforcement Learning

    quant-ph 2025-09 reject novelty 4.0 of 10

    QCA-MolGAN couples a quantum circuit Born machine prior with a graph GAN and multi-agent RL to generate drug-like molecules on QM9, reporting property balances but no comparison to the classical baseline.

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