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EEG Foundation Models for BCI Learn Diverse Features of Electrophysiology

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arxiv 2506.01867 v1 pith:NIBY43UE submitted 2025-06-02 q-bio.NC eess.SP

EEG Foundation Models for BCI Learn Diverse Features of Electrophysiology

classification q-bio.NC eess.SP
keywords datafoundationneuralpre-trainingapproachfeatureslearnmethods
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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Brain computer interface (BCI) research, as well as increasing portions of the field of neuroscience, have found success deploying large-scale artificial intelligence (AI) pre-training methods in conjunction with vast public repositories of data. This approach of pre-training foundation models using label-free, self-supervised objectives offers the potential to learn robust representations of neurophysiology, potentially addressing longstanding challenges in neural decoding. However, to date, much of this work has focused explicitly on standard BCI benchmarks and tasks, which likely overlooks the multitude of features these powerful methods might learn about brain function as well as other electrophysiological information. We introduce a new method for self-supervised BCI foundation model pre-training for EEG inspired by a transformer-based approach adapted from the HuBERT framework originally developed for speech processing. Our pipeline is specifically focused on low-profile, real-time usage, involving minimally pre-processed data and just eight EEG channels on the scalp. We show that our foundation model learned a representation of EEG that supports standard BCI tasks (P300, motor imagery), but also that this model learns features of neural data related to individual variability, and other salient electrophysiological components (e.g., alpha rhythms). In addition to describing and evaluating a novel approach to pre-training BCI models and neural decoding, this work opens the aperture for what kind of tasks and use-cases might exist for neural data in concert with powerful AI methods.

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  1. EEG-FM-Compass: Progress, Benchmarking, and Future Directions for EEG Foundation Models

    cs.LG 2026-01 conditional novelty 6.0

    A unified benchmark of 12 EEG foundation models across 13 datasets finds specialists remain competitive and larger pre-trained models do not consistently improve downstream decoding.