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Time-dependent corrections to effective rate and event statistics in Michaelis-Menten kinetics

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arxiv 1001.4212 v1 pith:V5BJKZOE submitted 2010-01-24 q-bio.QM cond-mat.stat-mechphysics.chem-phq-bio.MN

classification q-bio.QMcond-mat.stat-mechphysics.chem-phq-bio.MN
keywords kineticsgeometricmichaelis-mentencorrectionphasereactionapplicationapply
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We generalize the concept of the geometric phase in stochastic kinetics to a noncyclic evolution. Its application is demonstrated on kinetics of the Michaelis-Menten reaction. It is shown that the nonperiodic geometric phase is responsible for the correction to the Michaelis-Menten law when parameters, such as a substrate concentration, are changing with time. We apply these ideas to a model of chemical reactions in a bacterial culture of a growing size, where the geometric correction qualitatively changes the outcome of the reaction kinetics.

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