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A Community-Developed Open-Source Computational Ecosystem for Big Neuro Data

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arxiv 1804.02835 v2 pith:WYOKXTLO submitted 2018-04-09 q-bio.NC q-bio.QM

A Community-Developed Open-Source Computational Ecosystem for Big Neuro Data

Randal Burns , Eric Perlman , Alex Baden , William Gray Roncal , Ben Falk , Vikram Chandrashekhar , Forrest Collman , Sharmishtaa Seshamani
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Jesse Patsolic Kunal Lillaney Michael Kazhdan Robert Hider Jr. Derek Pryor Jordan Matelsky Timothy Gion Priya Manavalan Brock Wester Mark Chevillet Eric T. Trautman Khaled Khairy Eric Bridgeford Dean M. Kleissas Daniel J. Tward Ailey K. Crow Matthew A. Wright Michael I. Miller Stephen J Smith R. Jacob Vogelstein Karl Deisseroth Joshua T. Vogelstein
This is my paper
classification q-bio.NC q-bio.QM
keywords databraincomputationalecosystemacrossanalysisbecomingcloud
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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Big imaging data is becoming more prominent in brain sciences across spatiotemporal scales and phylogenies. We have developed a computational ecosystem that enables storage, visualization, and analysis of these data in the cloud, thusfar spanning 20+ publications and 100+ terabytes including nanoscale ultrastructure, microscale synaptogenetic diversity, and mesoscale whole brain connectivity, making NeuroData the largest and most diverse open repository of brain data.

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