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arxiv: 1011.3151 · v2 · pith:XIKEJEC2new · submitted 2010-11-13 · ❄️ cond-mat.soft · cs.ET· physics.bio-ph· q-bio.MN

Towards Biochemical Filter with Sigmoidal Response to pH Changes: Buffered Biocatalytic Signal Transduction

classification ❄️ cond-mat.soft cs.ETphysics.bio-phq-bio.MN
keywords biochemicalbiocatalyticfilteringsignalaccomplishedacid-theapproachbuffer
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We realize a biochemical filtering process by introducing a buffer in a biocatalytic signal-transduction logic system based on the function of an enzyme, esterase. The input, ethyl butyrate, is converted into butyric acid-the output signal, which in turn is measured by the drop in the pH value. The developed approach offers a versatile "network element" for increasing the complexity of biochemical information processing systems. Evaluation of an optimal regime for quality filtering is accomplished in the framework of a kinetic rate-equation model.

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