INFORM-CT: INtegrating LLMs and VLMs FOR Incidental Findings Management in Abdominal CT
Pith reviewed 2026-05-16 22:52 UTC · model grok-4.3
The pith
LLM-generated scripts integrate VLMs to automate incidental findings management in abdominal CT scans.
A machine-rendered reading of the paper's core claim, the machinery that carries it, and where it could break.
Core claim
A novel framework leverages LLMs and VLMs in a planner-executor setup to automate incidental findings detection, classification, and reporting for abdominal CT scans, where the LLM generates executable Python scripts that the executor runs using VLMs and other models to perform guideline-based checks, outperforming existing pure VLM-based methods on a CT abdominal benchmark for three organs.
What carries the argument
The planner-executor agentic framework, in which the LLM planner creates Python scripts from predefined base functions to orchestrate VLMs, segmentation models, and image processing for guideline adherence.
If this is right
- Automates incidental findings management in a fully automatic end-to-end manner for abdominal CT scans.
- Outperforms pure VLM-based approaches in accuracy on a benchmark dataset for three organs.
- Outperforms pure VLM-based approaches in efficiency.
- Follows established medical guidelines through scripted checks.
Where Pith is reading between the lines
- The framework could extend to other imaging modalities if similar base functions are defined.
- Success depends on the LLM not hallucinating invalid code, which might be tested by varying the guidelines.
- Integration with existing radiology workflows could reduce reporting variability across radiologists.
Load-bearing premise
The LLM planner can consistently generate correct and executable Python scripts that properly integrate the VLMs and models without introducing errors or hallucinations.
What would settle it
Running the system on the CT abdominal benchmark where the generated scripts produce incorrect detections or fail to execute, showing no improvement or errors compared to VLM baselines.
Figures
read the original abstract
Incidental findings in CT scans, though often benign, can have significant clinical implications and should be reported following established guidelines. Traditional manual inspection by radiologists is time-consuming and variable. This paper proposes a novel framework that leverages large language models (LLMs) and foundational vision-language models (VLMs) in a plan-and-execute agentic approach to improve the efficiency and precision of incidental findings detection, classification, and reporting for abdominal CT scans. Given medical guidelines for abdominal organs, the process of managing incidental findings is automated through a planner-executor framework. The planner, based on LLM, generates Python scripts using predefined base functions, while the executor runs these scripts to perform the necessary checks and detections, via VLMs, segmentation models, and image processing subroutines. We demonstrate the effectiveness of our approach through experiments on a CT abdominal benchmark for three organs, in a fully automatic end-to-end manner. Our results show that the proposed framework outperforms existing pure VLM-based approaches in terms of accuracy and efficiency.
Editorial analysis
A structured set of objections, weighed in public.
Referee Report
Summary. The paper proposes INFORM-CT, a plan-and-execute agentic framework that uses an LLM planner to generate Python scripts orchestrating VLMs, segmentation models, and image-processing routines to automatically detect, classify, and report incidental findings in abdominal CT scans according to organ-specific medical guidelines. Experiments on a benchmark for three organs are claimed to show outperformance over pure VLM baselines in accuracy and efficiency in a fully automatic end-to-end manner.
Significance. If the empirical claims hold after proper validation, the work could meaningfully advance automated medical imaging by showing how LLMs can compose reliable visual-analysis pipelines that follow structured clinical guidelines, potentially improving consistency and throughput in incidental-finding reporting. The agentic decomposition addresses a known limitation of standalone VLMs in handling multi-step guideline logic.
major comments (3)
- [Methods (Planner-Executor Framework)] The central superiority claim rests on the LLM planner emitting correct, executable Python scripts that integrate VLMs and segmentation without systematic hallucinations or runtime errors, yet no success-rate statistics, retry/verification loops, or ablation isolating planner failures from VLM performance are reported (Methods section on planner-executor framework and Results).
- [Results / Experimental Evaluation] The abstract and results assert outperformance in accuracy and efficiency on the three-organ CT benchmark, but supply no quantitative metrics, baseline definitions, error analysis, dataset size/sources, or statistical significance tests, rendering the data support for the claim unverifiable from the manuscript.
- [Discussion / Limitations] The weakest assumption—that the generated scripts reliably enforce organ-specific guideline checks without missing findings or spurious reports—is load-bearing for the end-to-end automation claim but receives no empirical validation or failure-mode analysis.
minor comments (2)
- [Abstract] The abstract would be strengthened by including at least one key numerical result (e.g., accuracy delta or runtime reduction) rather than a purely qualitative claim.
- [Methods] Notation for the predefined base functions available to the planner is introduced without an explicit table or appendix listing their signatures and constraints.
Simulated Author's Rebuttal
We thank the referee for the constructive feedback on our manuscript. The comments correctly identify gaps in reporting and validation that we will address through revisions. We provide point-by-point responses below.
read point-by-point responses
-
Referee: [Methods (Planner-Executor Framework)] The central superiority claim rests on the LLM planner emitting correct, executable Python scripts that integrate VLMs and segmentation without systematic hallucinations or runtime errors, yet no success-rate statistics, retry/verification loops, or ablation isolating planner failures from VLM performance are reported (Methods section on planner-executor framework and Results).
Authors: We agree that the current manuscript lacks explicit statistics on planner reliability. In the revised version, we will add success-rate statistics for the LLM planner across the benchmark cases, describe the retry and verification mechanisms used to handle execution errors, and include an ablation study separating planner-induced failures from downstream VLM performance. These additions will directly support the superiority claim. revision: yes
-
Referee: [Results / Experimental Evaluation] The abstract and results assert outperformance in accuracy and efficiency on the three-organ CT benchmark, but supply no quantitative metrics, baseline definitions, error analysis, dataset size/sources, or statistical significance tests, rendering the data support for the claim unverifiable from the manuscript.
Authors: The referee is correct that the current version does not provide the requested quantitative details. The revised manuscript will include specific accuracy and efficiency metrics with numerical values, explicit baseline definitions, error analysis breakdowns, dataset size and source information, and statistical significance tests (e.g., p-values) to make all claims fully verifiable. revision: yes
-
Referee: [Discussion / Limitations] The weakest assumption—that the generated scripts reliably enforce organ-specific guideline checks without missing findings or spurious reports—is load-bearing for the end-to-end automation claim but receives no empirical validation or failure-mode analysis.
Authors: We acknowledge that the manuscript does not yet provide empirical validation of this assumption. In the revised discussion and limitations sections, we will add a dedicated failure-mode analysis, including quantitative results on missed findings and spurious reports, along with examples of how the framework handles edge cases in guideline enforcement. revision: yes
Circularity Check
No significant circularity in empirical systems paper
full rationale
The paper presents an empirical framework for incidental findings management using LLMs and VLMs in a planner-executor setup. It contains no equations, mathematical derivations, fitted parameters, or self-referential definitions. Central claims rest on benchmark experiments for three organs rather than any reduction to inputs by construction. No load-bearing self-citations or uniqueness theorems are invoked. The LLM code-generation assumption is an implementation detail subject to empirical validation, not a circular step.
Axiom & Free-Parameter Ledger
axioms (2)
- domain assumption LLMs can generate correct and executable Python scripts for medical image analysis tasks based on guidelines
- domain assumption VLMs and segmentation models provide sufficient accuracy for incidental finding detection when scripted
Lean theorems connected to this paper
-
IndisputableMonolith/Foundation/AlexanderDuality.lean (D=3 forcing)alexander_duality_circle_linking unclear?
unclearRelation between the paper passage and the cited Recognition theorem.
We demonstrate the effectiveness of our approach through experiments on a CT abdominal benchmark for three organs, in a fully automatic end-to-end manner.
What do these tags mean?
- matches
- The paper's claim is directly supported by a theorem in the formal canon.
- supports
- The theorem supports part of the paper's argument, but the paper may add assumptions or extra steps.
- extends
- The paper goes beyond the formal theorem; the theorem is a base layer rather than the whole result.
- uses
- The paper appears to rely on the theorem as machinery.
- contradicts
- The paper's claim conflicts with a theorem or certificate in the canon.
- unclear
- Pith found a possible connection, but the passage is too broad, indirect, or ambiguous to say the theorem truly supports the claim.
Reference graph
Works this paper leans on
-
[1]
Akcay, S., Atapour-Abarghouei, A., Breckon, T.P.: Ganomaly: Semi- supervised anomaly detection via adversarial training. In: Computer Vision–ACCV 2018: 14th Asian Conference on Computer Vision, Perth, Australia, December 2–6, 2018, Revised Selected Papers, Part III 14. pp. 622–637. Springer (2019)
work page 2018
-
[2]
In: International Conference on Medical Im- age Computing and Computer-Assisted Intervention
Almeida, S.D., L¨ uth, C.T., Norajitra, T., Wald, T., Nolden, M., J¨ ager, P.F., Heussel, C.P., Biederer, J., Weinheimer, O., Maier-Hein, K.H.: coopd: re- formulating copd classification on chest ct scans as anomaly detection using contrastive representations. In: International Conference on Medical Im- age Computing and Computer-Assisted Intervention. pp...
work page 2023
-
[3]
Anthropic: Claude 3.5 sonnet (2024),https://www.anthropic.com/ claude/sonnet 10
work page 2024
-
[4]
Journal of the American College of Radiology 7(10), 754–773 (2010)
Berland, L.L., Silverman, S.G., Gore, R.M., Mayo-Smith, W.W., Megibow, A.J., Yee, J., Brink, J.A., Baker, M.E., Federle, M.P., Foley, W.D., et al.: Managing incidental findings on abdominal ct: white paper of the acr in- cidental findings committee. Journal of the American College of Radiology 7(10), 754–773 (2010)
work page 2010
-
[5]
A whole-slide foundation model for digital pathology from real-world data.Nature, pages 1–8, 2024a
Blankemeier, L., Cohen, J.P., Kumar, A., Van Veen, D., Gardezi, S.J.S., Paschali, M., Chen, Z., Delbrouck, J.B., Reis, E., Truyts, C., et al.: Merlin: A vision language foundation model for 3d computed tomography. arXiv preprint arXiv:2406.06512 (2024)
-
[6]
Chase, H.: LangChain (Oct 2022),https://github.com/langchain-ai/ langchain
work page 2022
-
[7]
In: International Conference on Med- ical Image Computing and Computer-Assisted Intervention
Chen, Y., Liu, C., Liu, X., Arcucci, R., Xiong, Z.: Bimcv-r: A landmark dataset for 3d ct text-image retrieval. In: International Conference on Med- ical Image Computing and Computer-Assisted Intervention. pp. 124–134. Springer (2024)
work page 2024
-
[8]
In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition
Gupta, T., Kembhavi, A.: Visual programming: Compositional visual rea- soning without training. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition. pp. 14953–14962 (2023)
work page 2023
-
[9]
arXiv preprint arXiv:2403.17834 , year=
Hamamci, I.E., Er, S., Almas, F., Simsek, A.G., Esirgun, S.N., Dogan, I., Dasdelen, M.F., Durugol, O.F., Wittmann, B., Amiranashvili, T., et al.: Developing generalist foundation models from a multimodal dataset for 3d computed tomography. arXiv preprint arXiv:2403.17834 (2024)
-
[10]
Nature methods18(2), 203–211 (2021)
Isensee, F., Jaeger, P.F., Kohl, S.A., Petersen, J., Maier-Hein, K.H.: nnu- net: a self-configuring method for deep learning-based biomedical image segmentation. Nature methods18(2), 203–211 (2021)
work page 2021
-
[11]
In: European Conference on Computer Vision
Ke, F., Cai, Z., Jahangard, S., Wang, W., Haghighi, P.D., Rezatofighi, H.: Hydra: A hyper agent for dynamic compositional visual reasoning. In: European Conference on Computer Vision. pp. 132–149. Springer (2024)
work page 2024
-
[12]
In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition
Khan, Z., BG, V.K., Schulter, S., Fu, Y., Chandraker, M.: Self-training large language models for improved visual program synthesis with visual reinforcement. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition. pp. 14344–14353 (2024)
work page 2024
-
[13]
In: International Conference on Medical Image Computing and Computer-Assisted Intervention
Lyu, F., Xu, J., Zhu, Y., Wong, G.L.H., Yuen, P.C.: Superpixel-guided segment anything model for liver tumor segmentation with couinaud seg- ment prompt. In: International Conference on Medical Image Computing and Computer-Assisted Intervention. pp. 678–688. Springer (2024)
work page 2024
-
[14]
In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition
Min, J., Buch, S., Nagrani, A., Cho, M., Schmid, C.: Morevqa: Exploring modular reasoning models for video question answering. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition. pp. 13235–13245 (2024) 11
work page 2024
-
[15]
OpenAI: Gpt-4o (2023),https://www.openai.com/gpt-4o
work page 2023
-
[16]
In: International confer- ence on machine learning
Radford, A., Kim, J.W., Hallacy, C., Ramesh, A., Goh, G., Agarwal, S., Sastry, G., Askell, A., Mishkin, P., Clark, J., et al.: Learning transferable visual models from natural language supervision. In: International confer- ence on machine learning. pp. 8748–8763. PMLR (2021)
work page 2021
-
[17]
Medical image analysis54, 30–44 (2019)
Schlegl, T., Seeb¨ ock, P., Waldstein, S.M., Langs, G., Schmidt-Erfurth, U.: f-anogan: Fast unsupervised anomaly detection with generative adversarial networks. Medical image analysis54, 30–44 (2019)
work page 2019
-
[18]
IEEE Access9, 118571–118583 (2021)
Shvetsova, N., Bakker, B., Fedulova, I., Schulz, H., Dylov, D.V.: Anomaly detection in medical imaging with deep perceptual autoencoders. IEEE Access9, 118571–118583 (2021)
work page 2021
-
[19]
In: Proceedings of the IEEE/CVF International Conference on Computer Vision
Sur´ ıs, D., Menon, S., Vondrick, C.: Vipergpt: Visual inference via python execution for reasoning. In: Proceedings of the IEEE/CVF International Conference on Computer Vision. pp. 11888–11898 (2023)
work page 2023
-
[20]
Radiology: Artificial Intelligence5(5) (2023)
Wasserthal, J., Breit, H.C., Meyer, M.T., Pradella, M., Hinck, D., Sauter, A.W., Heye, T., Boll, D.T., Cyriac, J., Yang, S., et al.: Totalsegmentator: Robust segmentation of 104 anatomic structures in ct images. Radiology: Artificial Intelligence5(5) (2023)
work page 2023
-
[21]
Yao, S., Zhao, J., Yu, D., Du, N., Shafran, I., Narasimhan, K., Cao, Y.: React: Synergizing reasoning and acting in language models (2023),https: //arxiv.org/abs/2210.03629
work page internal anchor Pith review Pith/arXiv arXiv 2023
-
[22]
Zhang, Y., Lu, D., Ning, M., Wang, L., Wei, D., Zheng, Y.: A model- agnostic framework for universal anomaly detection of multi-organ and multi-modal images. In: International Conference on Medical Image Com- puting and Computer-Assisted Intervention. pp. 232–241. Springer (2023) Appendix A Example Generated Program Algorithm 1 provides an illustrative ex...
work page 2023
discussion (0)
Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.