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arxiv: 2605.03546 · v1 · submitted 2026-05-05 · 💻 cs.SE · cs.AI

Recognition: unknown

ProgramBench: Can Language Models Rebuild Programs From Scratch?

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Pith reviewed 2026-05-07 15:58 UTC · model grok-4.3

classification 💻 cs.SE cs.AI
keywords ProgramBenchlanguage modelssoftware engineering agentscode generationbehavioral testingprogram reconstructionfuzzingbenchmarks
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The pith

Current language models cannot fully reconstruct any of 200 complex programs from scratch using only documentation and behavioral tests.

A machine-rendered reading of the paper's core claim, the machinery that carries it, and where it could break.

The paper introduces ProgramBench as a benchmark where agents receive a reference program and its documentation, then must architect and implement a matching codebase without any prescribed structure. End-to-end tests are created through agent-driven fuzzing to evaluate behavioral equivalence rather than code similarity. Evaluation of nine models shows none solve a single task completely, and the strongest model reaches 95 percent test passage on just 3 percent of tasks while defaulting to monolithic single-file code unlike typical human implementations.

Core claim

ProgramBench requires agents to rebuild full codebases ranging from small CLI tools to large systems such as FFmpeg, SQLite, and the PHP interpreter, given only the executable and documentation. Behavioral tests generated via agent-driven fuzzing allow assessment without dictating implementation details. Across 200 tasks, no model resolves any task fully, the best model passes 95 percent of tests on only 3 percent of tasks, and all models produce monolithic single-file outputs that diverge from human-written modular code.

What carries the argument

ProgramBench benchmark of 200 tasks with agent-driven fuzzing to produce structure-agnostic behavioral tests that verify functional equivalence to reference executables.

If this is right

  • Existing narrow benchmarks for code tasks overestimate language-model readiness for realistic software projects.
  • Agents tasked with long-term codebase growth will require substantial human input on architecture decisions.
  • Evaluation methods that avoid prescribing code structure expose large gaps between model outputs and human engineering practices.
  • Scaling current models will not suffice without advances in handling high-level design and modularity.

Where Pith is reading between the lines

These are editorial extensions of the paper, not claims the author makes directly.

  • The benchmark's focus on holistic rebuilding suggests future work should test iterative, multi-turn development rather than one-shot reconstruction.
  • Monolithic outputs may reflect training data biases toward small scripts, pointing to a need for explicit modular-design objectives.
  • Extending the task set beyond 200 programs would test whether current failure rates generalize to broader software domains.

Load-bearing premise

Agent-driven fuzzing creates tests that comprehensively capture required functionality without favoring any particular implementation style.

What would settle it

A model that passes 100 percent of tests on at least half the 200 tasks while producing multi-file modular codebases comparable to human reference implementations.

read the original abstract

Turning ideas into full software projects from scratch has become a popular use case for language models. Agents are being deployed to seed, maintain, and grow codebases over extended periods with minimal human oversight. Such settings require models to make high-level software architecture decisions. However, existing benchmarks measure focused, limited tasks such as fixing a single bug or developing a single, specified feature. We therefore introduce ProgramBench to measure the ability of software engineering agents to develop software holisitically. In ProgramBench, given only a program and its documentation, agents must architect and implement a codebase that matches the reference executable's behavior. End-to-end behavioral tests are generated via agent-driven fuzzing, enabling evaluation without prescribing implementation structure. Our 200 tasks range from compact CLI tools to widely used software such as FFmpeg, SQLite, and the PHP interpreter. We evaluate 9 LMs and find that none fully resolve any task, with the best model passing 95\% of tests on only 3\% of tasks. Models favor monolithic, single-file implementations that diverge sharply from human-written code.

Editorial analysis

A structured set of objections, weighed in public.

Desk editor's note, referee report, simulated authors' rebuttal, and a circularity audit. Tearing a paper down is the easy half of reading it; the pith above is the substance, this is the friction.

Referee Report

2 major / 2 minor

Summary. The paper introduces ProgramBench, a benchmark for evaluating language models and software engineering agents on the task of rebuilding complete programs from scratch. Given only a reference executable and its documentation, agents must architect and implement a matching codebase; success is measured via end-to-end behavioral tests produced by agent-driven fuzzing rather than structure-prescribing unit tests. The benchmark contains 200 tasks spanning compact CLI tools to complex real-world systems including FFmpeg, SQLite, and the PHP interpreter. Evaluation of nine LMs finds that none fully resolve any task, the strongest model reaches 95% test pass rate on only 3% of tasks, and generated solutions are overwhelmingly monolithic single-file implementations that diverge from human-written code.

Significance. If the fuzzing-based tests prove comprehensive and unbiased, the work supplies a demanding new evaluation axis for agentic coding that moves beyond bug fixing or single-feature tasks. The empirical demonstration that current models cannot produce functionally correct, architecturally plausible implementations at scale would be a useful signal for the field and could motivate research on long-horizon planning and modular design in LLMs. The decision to avoid prescribing implementation structure via behavioral testing is a methodological strength worth preserving if coverage and validity can be demonstrated.

major comments (2)
  1. [Abstract / benchmark construction] Abstract and benchmark-construction section: the central claim that 'none fully resolve any task' and the reported failure rates depend on the assertion that agent-driven fuzzing produces tests that 'comprehensively capture required functionality without prescribing implementation structure.' No coverage metrics, mutation strategy details, number of generated tests per task, or validation against human-written test suites for reference programs (FFmpeg, SQLite, PHP interpreter) are provided. For programs with substantial internal state, error paths, or non-determinism, incomplete coverage would allow a correct implementation to fail the benchmark or an incorrect one to pass, directly undermining the headline result.
  2. [Results / evaluation] Results section (performance tables): the statement that the best model passes 95% of tests on only 3% of tasks is presented without accompanying information on statistical significance, run-to-run variance, or the exact definition of 'fully resolve.' This makes it difficult to judge whether the reported percentages are robust or sensitive to small changes in test generation.
minor comments (2)
  1. [Abstract] Abstract contains the typo 'holisitically' (should be 'holistically').
  2. [Benchmark description] The description of the 200 tasks would benefit from a summary table or breakdown by category (e.g., CLI tools vs. interpreters) and average task size or complexity metrics to help readers gauge representativeness.

Simulated Author's Rebuttal

2 responses · 0 unresolved

We thank the referee for the detailed and constructive review. The comments highlight important aspects of benchmark validity and result robustness that we have addressed through revisions to the manuscript.

read point-by-point responses
  1. Referee: [Abstract / benchmark construction] Abstract and benchmark-construction section: the central claim that 'none fully resolve any task' and the reported failure rates depend on the assertion that agent-driven fuzzing produces tests that 'comprehensively capture required functionality without prescribing implementation structure.' No coverage metrics, mutation strategy details, number of generated tests per task, or validation against human-written test suites for reference programs (FFmpeg, SQLite, PHP interpreter) are provided. For programs with substantial internal state, error paths, or non-determinism, incomplete coverage would allow a correct implementation to fail the benchmark or an incorrect one to pass, directly undermining the headline result.

    Authors: We agree that the original manuscript provided insufficient methodological detail on the agent-driven fuzzing process. In the revised version, we have added a dedicated subsection under benchmark construction that specifies: the average number of tests generated per task (ranging from 40 for simple CLIs to over 150 for complex systems), the mutation and exploration strategies (input fuzzing, state perturbation, error-path triggering, and documentation-guided scenario generation), and quantitative coverage metrics (statement and branch coverage) computed on a stratified sample of 40 tasks. For validation, we report overlap with available human-written test suites on smaller reference programs and note that for FFmpeg, SQLite, and PHP the tests prioritize observable I/O and documented behaviors. We have also inserted a limitations paragraph acknowledging that full coverage for programs with extensive internal state remains challenging and that non-determinism is mitigated by repeated execution with fixed seeds. revision: yes

  2. Referee: [Results / evaluation] Results section (performance tables): the statement that the best model passes 95% of tests on only 3% of tasks is presented without accompanying information on statistical significance, run-to-run variance, or the exact definition of 'fully resolve.' This makes it difficult to judge whether the reported percentages are robust or sensitive to small changes in test generation.

    Authors: We have clarified the definition of 'fully resolve' in both the abstract and results section as achieving a 100% pass rate on the complete set of generated tests for a given task. The results section now includes per-model mean pass rates and standard deviations computed across five independent runs (different random seeds for both test generation and model sampling). We additionally report that the proportion of tasks on which the strongest model exceeds the 95% threshold is statistically significantly lower than the proportion exceeding 80% or 90% thresholds (p < 0.01, paired t-test). These changes demonstrate that the headline 3% figure is stable under the observed variance. revision: yes

Circularity Check

0 steps flagged

No circularity: empirical benchmark with external references

full rationale

The paper is a purely empirical benchmark study that introduces ProgramBench to evaluate language models on holistic software development tasks. It contains no mathematical derivations, equations, fitted parameters, or first-principles claims that could reduce to their own inputs. All results are measured by direct execution against external reference executables and fuzzing-derived behavioral tests, with no self-definitional loops, self-citation load-bearing premises, or renamed known results. The evaluation chain is self-contained against independent benchmarks and reference implementations.

Axiom & Free-Parameter Ledger

0 free parameters · 0 axioms · 0 invented entities

No mathematical derivations or physical axioms; the central claim rests on the assumption that behavioral equivalence via fuzzing tests is a sufficient proxy for correct program reconstruction.

pith-pipeline@v0.9.0 · 5525 in / 989 out tokens · 32931 ms · 2026-05-07T15:58:57.184136+00:00 · methodology

discussion (0)

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Reference graph

Works this paper leans on

21 extracted references · 18 canonical work pages · 10 internal anchors

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    blocklist

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