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BrainBERT: Self-supervised representation learning for intracranial recordings

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arxiv 2302.14367 v1 pith:CZUHNZ3R submitted 2023-02-28 cs.LG eess.SPq-bio.NC

classification cs.LGeess.SPq-bio.NC
keywords neuralbrainlanguagerecordingsapproachdatalearninglike
verification ladder T0 review T1 audit T2 compute T3 formal

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We create a reusable Transformer, BrainBERT, for intracranial recordings bringing modern representation learning approaches to neuroscience. Much like in NLP and speech recognition, this Transformer enables classifying complex concepts, i.e., decoding neural data, with higher accuracy and with much less data by being pretrained in an unsupervised manner on a large corpus of unannotated neural recordings. Our approach generalizes to new subjects with electrodes in new positions and to unrelated tasks showing that the representations robustly disentangle the neural signal. Just like in NLP where one can study language by investigating what a language model learns, this approach opens the door to investigating the brain by what a model of the brain learns. As a first step along this path, we demonstrate a new analysis of the intrinsic dimensionality of the computations in different areas of the brain. To construct these representations, we combine a technique for producing super-resolution spectrograms of neural data with an approach designed for generating contextual representations of audio by masking. In the future, far more concepts will be decodable from neural recordings by using representation learning, potentially unlocking the brain like language models unlocked language.

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Forward citations

Cited by 9 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. OpenAlex reports about 14 citations worldwide. Full citation record

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    A two-stage model aligns intracranial EEG signals with text embeddings and reconstructs the semantic content of perceived speech from as little as 30 minutes of neural data.

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    BrainStratify's coarse-to-fine disentanglement, electrode clustering plus decoupled product quantization, modestly improves speech decoding over prior methods on sEEG and epidural ECoG datasets.

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