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ChemGAN challenge for drug discovery: can AI reproduce natural chemical diversity?

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arxiv 1708.08227 v3 pith:D56GPOQO submitted 2017-08-28 stat.ML cs.AIcs.LG

ChemGAN challenge for drug discovery: can AI reproduce natural chemical diversity?

classification stat.ML cs.AIcs.LG
keywords challengechemicaldiversitydesireddiscoverydruggenerativemodel
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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Generating molecules with desired chemical properties is important for drug discovery. The use of generative neural networks is promising for this task. However, from visual inspection, it often appears that generated samples lack diversity. In this paper, we quantify this internal chemical diversity, and we raise the following challenge: can a nontrivial AI model reproduce natural chemical diversity for desired molecules? To illustrate this question, we consider two generative models: a Reinforcement Learning model and the recently introduced ORGAN. Both fail at this challenge. We hope this challenge will stimulate research in this direction.

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