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arxiv: 1406.5401 · v2 · pith:SYKXARFQnew · submitted 2014-06-20 · ⚛️ physics.bio-ph · cond-mat.soft· cond-mat.stat-mech

Tension-induced binding of semiflexible biopolymers

classification ⚛️ physics.bio-ph cond-mat.softcond-mat.stat-mech
keywords bindingcross-linkssitestensionboundchainscross-overenergy
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We investigate theoretically the effect of polymer tension on the collective behavior of reversibly binding cross-links. For this purpose, we employ a model of two weakly bending wormlike chains aligned in parallel by a tensile force, with a sequence of inter-chain binding sites regularly spaced along the contours. Reversible cross-links attach and detach at the sites with an affinity controlled by a chemical potential. In a mean-field approach, we calculate the free energy of the system and find the emergence of a free-energy barrier which controls the reversible (un)binding. The tension affects the conformational entropy of the chains which competes with the binding energy of the cross-links. This competition gives rise to a sudden increase in the fraction of bound sites as the tension increases. We show that this transition is related to the cross-over between weak and strong localization of a directed polymer in a pinning potential. The cross-over to the strongly bound state can be interpreted as a mechanism for force-stiffening of cross-linked polymers -- beyond the elasticity of a single wormlike chain.

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