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Graph Neural Ordinary Differential Equations

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arxiv 1911.07532 v4 pith:7S24O4C7 submitted 2019-11-18 cs.LG cs.AIstat.ML

classification cs.LGcs.AIstat.ML
keywords differentialequationsgraphneuralframeworkgdesgnnsordinary
verification ladder T0 review T1 audit T2 compute T3 formal
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We introduce the framework of continuous--depth graph neural networks (GNNs). Graph neural ordinary differential equations (GDEs) are formalized as the counterpart to GNNs where the input-output relationship is determined by a continuum of GNN layers, blending discrete topological structures and differential equations. The proposed framework is shown to be compatible with various static and autoregressive GNN models. Results prove general effectiveness of GDEs: in static settings they offer computational advantages by incorporating numerical methods in their forward pass; in dynamic settings, on the other hand, they are shown to improve performance by exploiting the geometry of the underlying dynamics.

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Forward citations

Cited by 11 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. OpenAlex reports about 62 citations worldwide. Full citation record

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    GNODE, a graph-neural-network-plus-neural-ODE surrogate with augmented latent dimensions, predicts unsteady transonic airfoil flows with more stable and accurate rollouts than an autoregressive GNN baseline.

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  4. TANGO: Graph Neural Dynamics via Learned Energy and Tangential Flows

    cs.LG 2025-08 conditional novelty 6.0 of 10

    TANGO adds a learnable energy gradient and an orthogonal tangential flow to GNN layers, improving long-range and heterophilic graph benchmarks.

  5. STAGED: A Multi-Agent Neural Network for Learning Cellular Interaction Dynamics

    cs.LG 2025-07 conditional novelty 6.0 of 10

    STAGED uses agent-based graph neural ODEs to model and predict gene expression dynamics from spatial transcriptomics, recovering simulated cell-cell and gene-gene interactions in small synthetic systems.

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    A graph-autoencoder plus neural-ODE surrogate predicts neurite transport fields in latent space with about 3 percent mean error and up to 8 percent maximum error on unseen geometries, about 10x faster than the prior P...

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    ODeform combines two parallel neural ODEs, one for rigid motion and one for local deformation, to predict arbitrary-time 3D point-cloud deformation from an initial state and physical parameters, outperforming simpler ...

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    A GNN built on a wave-equation recurrence is presented, but the claimed unconditional stability is disproved by the paper's own characteristic equation.

  11. Hyperbolic-PDE GNN: Spectral Graph Neural Networks in the Perspective of A System of Hyperbolic Partial Differential Equations

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