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Transition1x -- a Dataset for Building Generalizable Reactive Machine Learning Potentials

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arxiv 2207.12858 v2 pith:PVZMKQXC submitted 2022-07-25 physics.chem-ph cs.AIphysics.comp-ph

Transition1x -- a Dataset for Building Generalizable Reactive Machine Learning Potentials

classification physics.chem-ph cs.AIphysics.comp-ph
keywords modelstransition1xcalculationsconfigurationsdatasetsmoleculartrainingbenchmark
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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Machine Learning (ML) models have, in contrast to their usefulness in molecular dynamics studies, had limited success as surrogate potentials for reaction barrier search. It is due to the scarcity of training data in relevant transition state regions of chemical space. Currently, available datasets for training ML models on small molecular systems almost exclusively contain configurations at or near equilibrium. In this work, we present the dataset Transition1x containing 9.6 million Density Functional Theory (DFT) calculations of forces and energies of molecular configurations on and around reaction pathways at the wB97x/6-31G(d) level of theory. The data was generated by running Nudged Elastic Band (NEB) calculations with DFT on 10k reactions while saving intermediate calculations. We train state-of-the-art equivariant graph message-passing neural network models on Transition1x and cross-validate on the popular ANI1x and QM9 datasets. We show that ML models cannot learn features in transition-state regions solely by training on hitherto popular benchmark datasets. Transition1x is a new challenging benchmark that will provide an important step towards developing next-generation ML force fields that also work far away from equilibrium configurations and reactive systems.

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