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arxiv 2403.18028 v2 pith:LAZEUJAH submitted 2024-03-26 cs.LG cs.AIcs.CVq-bio.PE

Predicting Species Occurrence Patterns from Partial Observations

classification cs.LG cs.AIcs.CVq-bio.PE
keywords speciesdataobservationaloccurrencepatternspredictingotherpartial
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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To address the interlinked biodiversity and climate crises, we need an understanding of where species occur and how these patterns are changing. However, observational data on most species remains very limited, and the amount of data available varies greatly between taxonomic groups. We introduce the problem of predicting species occurrence patterns given (a) satellite imagery, and (b) known information on the occurrence of other species. To evaluate algorithms on this task, we introduce SatButterfly, a dataset of satellite images, environmental data and observational data for butterflies, which is designed to pair with the existing SatBird dataset of bird observational data. To address this task, we propose a general model, R-Tran, for predicting species occurrence patterns that enables the use of partial observational data wherever found. We find that R-Tran outperforms other methods in predicting species encounter rates with partial information both within a taxon (birds) and across taxa (birds and butterflies). Our approach opens new perspectives to leveraging insights from species with abundant data to other species with scarce data, by modelling the ecosystems in which they co-occur.

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