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Graph-Mamba: Towards Long-Range Graph Sequence Modeling with Selective State Spaces

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arxiv 2402.00789 v1 pith:6ZDMEA3Q submitted 2024-02-01 cs.LG cs.AI

Graph-Mamba: Towards Long-Range Graph Sequence Modeling with Selective State Spaces

classification cs.LG cs.AI
keywords graphlong-rangegraph-mambaattentioncomputationalmodelingcontextcost
verification ladder T0 review T1 audit T2 compute T3 formal T4 reserved
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Attention mechanisms have been widely used to capture long-range dependencies among nodes in Graph Transformers. Bottlenecked by the quadratic computational cost, attention mechanisms fail to scale in large graphs. Recent improvements in computational efficiency are mainly achieved by attention sparsification with random or heuristic-based graph subsampling, which falls short in data-dependent context reasoning. State space models (SSMs), such as Mamba, have gained prominence for their effectiveness and efficiency in modeling long-range dependencies in sequential data. However, adapting SSMs to non-sequential graph data presents a notable challenge. In this work, we introduce Graph-Mamba, the first attempt to enhance long-range context modeling in graph networks by integrating a Mamba block with the input-dependent node selection mechanism. Specifically, we formulate graph-centric node prioritization and permutation strategies to enhance context-aware reasoning, leading to a substantial improvement in predictive performance. Extensive experiments on ten benchmark datasets demonstrate that Graph-Mamba outperforms state-of-the-art methods in long-range graph prediction tasks, with a fraction of the computational cost in both FLOPs and GPU memory consumption. The code and models are publicly available at https://github.com/bowang-lab/Graph-Mamba.

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Forward citations

Cited by 14 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score.

  1. Mamba-Based Graph Convolutional Networks: Tackling Over-smoothing with Selective State Space

    cs.LG 2025-01 unverdicted novelty 7.0

    MbaGCN combines message aggregation, selective state space transitions, and node state prediction to create a more scalable deep graph convolutional network.

  2. Benchmarking Sheaf Neural Networks for Inductive Tasks

    cs.LG 2026-08 conditional novelty 6.0

    On 14 inductive graph benchmarks, sheaf neural networks underperform strong GNN baselines, and their performance is driven more by the surrounding architecture than by the sheaf diffusion mechanism.

  3. Navigating Hierarchy: Hyperbolic Learning on Brain Graphs for Disorder Diagnosis

    cs.CV 2026-07 conditional novelty 6.0

    A hyperbolic-space framework with geometric entailment constraints and a graph-aware Mamba module improves brain-network classification of ASD and MDD by explicitly modeling ROI-to-community-to-whole-brain hierarchy.

  4. SFMambaNet: Spectral-Frequency Enhanced Selective State Space Model for Correspondence Pruning

    cs.CV 2026-06 unverdicted novelty 6.0

    SFMambaNet combines a Local Spectral-Geometric Attention block with a Spectral-Integrated Global Mamba block to improve inlier-outlier separation in two-view correspondence pruning.

  5. ExPath: Targeted Pathway Inference for Biological Knowledge Bases via Graph Learning and Explanation

    cs.LG 2025-02 unverdicted novelty 6.0

    ExPath is a subgraph inference framework that classifies bio-networks with experimental data and uses explanations to identify targeted pathways, reporting up to 4.5x higher Fidelity+ and 14x lower Fidelity- than base...

  6. Gated Linear Attention Transformers with Hardware-Efficient Training

    cs.LG 2023-12 unverdicted novelty 6.0

    Gated linear attention Transformers achieve competitive language modeling results with linear-time inference, superior length generalization, and higher training throughput than Mamba.

  7. Graph Mamba Operator: A Latent Simulator for Interacting Particle Systems

    cs.LG 2026-06 unverdicted novelty 5.0

    GraMO couples graph interactions and temporal state updates in one linear recurrence with input-dependent coefficients to simulate N-body, motion, and robotics systems with lower long-horizon error than prior GNN or S...

  8. Graph Mamba Survival Analysis Based on Topology-Aware ordering

    cs.LG 2026-05 unverdicted novelty 5.0

    TopoMamSurv introduces topology-aware ordering and bidirectional Mamba with GCN for efficient WSI graph survival analysis, claiming performance gains on five TCGA datasets.

  9. S$^3$GNN: Efficient Global Mixing and Local Message Passing for Long-Range Graph Learning

    cs.LG 2026-05 unverdicted novelty 5.0

    S³GNN mitigates oversquashing in message-passing networks via lightweight global mixing without strong prior assumptions, yielding up to 10x error reduction and 50% fewer parameters across multiple domains.

  10. 3DMambaComplete: Exploring Structured State Space Model for Point Cloud Completion

    cs.CV 2024-04 unverdicted novelty 5.0

    3DMambaComplete applies the Mamba model to point cloud completion via hyperpoint generation, spatial spreading, and mesh deformation, claiming better results than prior methods on benchmarks.

  11. EnergyMamba: An Uncertainty-Aware Graph-Enhanced Selective State Space Model for Energy Consumption Prediction

    cs.AI 2026-05 unverdicted novelty 4.0

    EnergyMamba improves energy consumption prediction accuracy by about 5% and uncertainty quantification by about 6% over 15 baselines on four real-world US datasets by combining graph-enhanced Mamba with adaptive seque...

  12. State Space Models Meet Remote Sensing: A Survey

    cs.CV 2026-06 unverdicted novelty 2.0

    A literature survey of State Space Model methods applied to remote sensing tasks, architectures, and challenges since their introduction to the field.

  13. A Survey of Mamba

    cs.LG 2024-08 unverdicted novelty 2.0

    The paper consolidates existing research on Mamba models, their architecture variants, adaptations to different data modalities, and applications across domains.

  14. Advancing Intelligent Sequence Modeling: Evolution, Trade-offs, and Applications of State- Space Architectures from S4 to Mamba

    cs.LG 2025-03 unverdicted

    A survey tracing the evolution of state-space models like S4 and Mamba, their efficiency trade-offs, and applications in NLP, vision, and other domains.